Gene : Brara.C04221 B. rapa FPsc v1.3
Defline:  (1 of 7) PF04057 - Replication factor-A protein 1, N-terminal domain (Rep-A_N) Genomic Order:  4221
Name:  ? Brara.C04221 Secondary Identifier:  ? PAC:30616575
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C04221 0.5kb upstream 0.5kb upstream 3461 true A03: 22250018-22253478 Brassica rapa FPsc
Brara.C04221 0.5kb upstream 0.5kb upstream 500 false A03: 22252979-22253478 Brassica rapa FPsc
Brara.C04221 0.5kb downstream 0.5kb downstream 3461 true A03: 22249518-22252978 Brassica rapa FPsc
Brara.C04221 0.5kb downstream 0.5kb downstream 500 false A03: 22249518-22250017 Brassica rapa FPsc
Brara.C04221 1.0kb upstream 1.0kb upstream 3961 true A03: 22250018-22253978 Brassica rapa FPsc
Brara.C04221 1.0kb upstream 1.0kb upstream 1000 false A03: 22252979-22253978 Brassica rapa FPsc
Brara.C04221 1.0kb downstream 1.0kb downstream 3961 true A03: 22249018-22252978 Brassica rapa FPsc
Brara.C04221 1.0kb downstream 1.0kb downstream 1000 false A03: 22249018-22250017 Brassica rapa FPsc
Brara.C04221 2.0kb upstream 2.0kb upstream 4961 true A03: 22250018-22254978 Brassica rapa FPsc
Brara.C04221 2.0kb upstream 2.0kb upstream 2000 false A03: 22252979-22254978 Brassica rapa FPsc
Brara.C04221 2.0kb downstream 2.0kb downstream 4961 true A03: 22248018-22252978 Brassica rapa FPsc
Brara.C04221 2.0kb downstream 2.0kb downstream 2000 false A03: 22248018-22250017 Brassica rapa FPsc
Brara.C04221 5.0kb upstream 5.0kb upstream 7961 true A03: 22250018-22257978 Brassica rapa FPsc
Brara.C04221 5.0kb upstream 5.0kb upstream 5000 false A03: 22252979-22257978 Brassica rapa FPsc
Brara.C04221 5.0kb downstream 5.0kb downstream 7961 true A03: 22245018-22252978 Brassica rapa FPsc
Brara.C04221 5.0kb downstream 5.0kb downstream 5000 false A03: 22245018-22250017 Brassica rapa FPsc
Brara.C04221 10.0kb upstream 10.0kb upstream 12961 true A03: 22250018-22262978 Brassica rapa FPsc
Brara.C04221 10.0kb upstream 10.0kb upstream 10000 false A03: 22252979-22262978 Brassica rapa FPsc
Brara.C04221 10.0kb downstream 10.0kb downstream 12961 true A03: 22240018-22252978 Brassica rapa FPsc
Brara.C04221 10.0kb downstream 10.0kb downstream 10000 false A03: 22240018-22250017 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121504269 5273 Angiosperm Singleton cluster - no MSA
122347260 5261 Brassicaceae Singleton cluster - no MSA
123786817 5264 Brassicales-Malvales Singleton cluster - no MSA
124284914 5266 SBM Singleton cluster - no MSA
124139037 5268 Malvidae Singleton cluster - no MSA
123866490 5270 Rosid Singleton cluster - no MSA
123451506 5271 Pentapetalae Singleton cluster - no MSA
122487011 5272 Eudicot Singleton cluster - no MSA
120777524 5274 Embryophyte Singleton cluster - no MSA
123426361 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier