Gene : Bostr.26833s0135 B. stricta v1.2

Defline:  (1 of 9) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT Genomic Order:  135
Name:  ? Bostr.26833s0135 Secondary Identifier:  ? PAC:30652947

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26833s0135 0.5kb upstream 0.5kb upstream 3696 true Scaffold26833: 725824-729519 Boechera stricta
Bostr.26833s0135 0.5kb upstream 0.5kb upstream 500 false Scaffold26833: 725824-726323 Boechera stricta
Bostr.26833s0135 0.5kb downstream 0.5kb downstream 3696 true Scaffold26833: 726324-730019 Boechera stricta
Bostr.26833s0135 0.5kb downstream 0.5kb downstream 500 false Scaffold26833: 729520-730019 Boechera stricta
Bostr.26833s0135 1.0kb upstream 1.0kb upstream 4196 true Scaffold26833: 725324-729519 Boechera stricta
Bostr.26833s0135 1.0kb upstream 1.0kb upstream 1000 false Scaffold26833: 725324-726323 Boechera stricta
Bostr.26833s0135 1.0kb downstream 1.0kb downstream 4196 true Scaffold26833: 726324-730519 Boechera stricta
Bostr.26833s0135 1.0kb downstream 1.0kb downstream 1000 false Scaffold26833: 729520-730519 Boechera stricta
Bostr.26833s0135 2.0kb upstream 2.0kb upstream 5196 true Scaffold26833: 724324-729519 Boechera stricta
Bostr.26833s0135 2.0kb upstream 2.0kb upstream 2000 false Scaffold26833: 724324-726323 Boechera stricta
Bostr.26833s0135 2.0kb downstream 2.0kb downstream 5196 true Scaffold26833: 726324-731519 Boechera stricta
Bostr.26833s0135 2.0kb downstream 2.0kb downstream 2000 false Scaffold26833: 729520-731519 Boechera stricta
Bostr.26833s0135 5.0kb upstream 5.0kb upstream 8196 true Scaffold26833: 721324-729519 Boechera stricta
Bostr.26833s0135 5.0kb upstream 5.0kb upstream 5000 false Scaffold26833: 721324-726323 Boechera stricta
Bostr.26833s0135 5.0kb downstream 5.0kb downstream 8196 true Scaffold26833: 726324-734519 Boechera stricta
Bostr.26833s0135 5.0kb downstream 5.0kb downstream 5000 false Scaffold26833: 729520-734519 Boechera stricta
Bostr.26833s0135 10.0kb upstream 10.0kb upstream 13196 true Scaffold26833: 716324-729519 Boechera stricta
Bostr.26833s0135 10.0kb upstream 10.0kb upstream 10000 false Scaffold26833: 716324-726323 Boechera stricta
Bostr.26833s0135 10.0kb downstream 10.0kb downstream 13196 true Scaffold26833: 726324-739519 Boechera stricta
Bostr.26833s0135 10.0kb downstream 10.0kb downstream 10000 false Scaffold26833: 729520-739519 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369449 5261 Brassicaceae View MSA
123830922 5264 Brassicales-Malvales View MSA
124345797 5266 SBM View MSA
124238177 5268 Malvidae View MSA
124062853 5270 Rosid View MSA
123746510 5271 Pentapetalae View MSA
122790836 5272 Eudicot View MSA
122046944 5273 Angiosperm View MSA
121346353 5274 Embryophyte View MSA
123426361 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain