Gene : Cagra.1365s0008 C. grandiflora v1.1
Defline:  (1 of 2) KOG0851 - Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins Genomic Order:  8
Name:  ? Cagra.1365s0008 Secondary Identifier:  ? PAC:28919277
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1365s0008 0.5kb upstream 0.5kb upstream 3457 true Scaffold1365: 17160-20616 Capsella grandiflora
Cagra.1365s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold1365: 17160-17659 Capsella grandiflora
Cagra.1365s0008 0.5kb downstream 0.5kb downstream 3457 true Scaffold1365: 17660-21116 Capsella grandiflora
Cagra.1365s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold1365: 20617-21116 Capsella grandiflora
Cagra.1365s0008 1.0kb upstream 1.0kb upstream 3957 true Scaffold1365: 16660-20616 Capsella grandiflora
Cagra.1365s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold1365: 16660-17659 Capsella grandiflora
Cagra.1365s0008 1.0kb downstream 1.0kb downstream 3957 true Scaffold1365: 17660-21616 Capsella grandiflora
Cagra.1365s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold1365: 20617-21616 Capsella grandiflora
Cagra.1365s0008 2.0kb upstream 2.0kb upstream 4957 true Scaffold1365: 15660-20616 Capsella grandiflora
Cagra.1365s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold1365: 15660-17659 Capsella grandiflora
Cagra.1365s0008 2.0kb downstream 2.0kb downstream 4957 true Scaffold1365: 17660-22616 Capsella grandiflora
Cagra.1365s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold1365: 20617-22616 Capsella grandiflora
Cagra.1365s0008 5.0kb upstream 5.0kb upstream 7957 true Scaffold1365: 12660-20616 Capsella grandiflora
Cagra.1365s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold1365: 12660-17659 Capsella grandiflora
Cagra.1365s0008 5.0kb downstream 5.0kb downstream 7957 true Scaffold1365: 17660-25616 Capsella grandiflora
Cagra.1365s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold1365: 20617-25616 Capsella grandiflora
Cagra.1365s0008 10.0kb upstream 10.0kb upstream 12957 true Scaffold1365: 7660-20616 Capsella grandiflora
Cagra.1365s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold1365: 7660-17659 Capsella grandiflora
Cagra.1365s0008 10.0kb downstream 10.0kb downstream 12957 true Scaffold1365: 17660-30616 Capsella grandiflora
Cagra.1365s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold1365: 20617-30616 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360852 5261 Brassicaceae View MSA
123798045 5264 Brassicales-Malvales View MSA
124295727 5266 SBM View MSA
124148085 5268 Malvidae View MSA
124062853 5270 Rosid View MSA
123746510 5271 Pentapetalae View MSA
122790836 5272 Eudicot View MSA
122046944 5273 Angiosperm View MSA
121346353 5274 Embryophyte View MSA
123426361 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain