Gene : Carub.0008s2462 C. rubella v1.1
Defline:  (1 of 2) PTHR22950//PTHR22950:SF295 - AMINO ACID TRANSPORTER // AMINO ACID PERMEASE 2 Genomic Order:  2462
Name:  ? Carub.0008s2462 Secondary Identifier:  ? PAC:39251626
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2462 0.5kb upstream 0.5kb upstream 2279 true scaffold_8: 11910995-11913273 Capsella rubella
Carub.0008s2462 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 11910995-11911494 Capsella rubella
Carub.0008s2462 0.5kb downstream 0.5kb downstream 2279 true scaffold_8: 11911495-11913773 Capsella rubella
Carub.0008s2462 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 11913274-11913773 Capsella rubella
Carub.0008s2462 1.0kb upstream 1.0kb upstream 2779 true scaffold_8: 11910495-11913273 Capsella rubella
Carub.0008s2462 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 11910495-11911494 Capsella rubella
Carub.0008s2462 1.0kb downstream 1.0kb downstream 2779 true scaffold_8: 11911495-11914273 Capsella rubella
Carub.0008s2462 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 11913274-11914273 Capsella rubella
Carub.0008s2462 2.0kb upstream 2.0kb upstream 3779 true scaffold_8: 11909495-11913273 Capsella rubella
Carub.0008s2462 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 11909495-11911494 Capsella rubella
Carub.0008s2462 2.0kb downstream 2.0kb downstream 3779 true scaffold_8: 11911495-11915273 Capsella rubella
Carub.0008s2462 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 11913274-11915273 Capsella rubella
Carub.0008s2462 5.0kb upstream 5.0kb upstream 6779 true scaffold_8: 11906495-11913273 Capsella rubella
Carub.0008s2462 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 11906495-11911494 Capsella rubella
Carub.0008s2462 5.0kb downstream 5.0kb downstream 6779 true scaffold_8: 11911495-11918273 Capsella rubella
Carub.0008s2462 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 11913274-11918273 Capsella rubella
Carub.0008s2462 10.0kb upstream 10.0kb upstream 11779 true scaffold_8: 11901495-11913273 Capsella rubella
Carub.0008s2462 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 11901495-11911494 Capsella rubella
Carub.0008s2462 10.0kb downstream 10.0kb downstream 11779 true scaffold_8: 11911495-11923273 Capsella rubella
Carub.0008s2462 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 11913274-11923273 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370243 5261 Brassicaceae View MSA
123799924 5264 Brassicales-Malvales View MSA
124297393 5266 SBM View MSA
124149298 5268 Malvidae View MSA
123875131 5270 Rosid View MSA
123459006 5271 Pentapetalae View MSA
122494402 5272 Eudicot View MSA
122048359 5273 Angiosperm View MSA
121351118 5274 Embryophyte View MSA
123426213 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain