Gene : Carub.0008s2060 C. rubella v1.1
Defline:  (1 of 247) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  2060
Name:  ? Carub.0008s2060 Secondary Identifier:  ? PAC:39252684
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2060 0.5kb upstream 0.5kb upstream 1116 true scaffold_8: 10360904-10362019 Capsella rubella
Carub.0008s2060 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 10361520-10362019 Capsella rubella
Carub.0008s2060 0.5kb downstream 0.5kb downstream 1116 true scaffold_8: 10360404-10361519 Capsella rubella
Carub.0008s2060 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 10360404-10360903 Capsella rubella
Carub.0008s2060 1.0kb upstream 1.0kb upstream 1616 true scaffold_8: 10360904-10362519 Capsella rubella
Carub.0008s2060 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 10361520-10362519 Capsella rubella
Carub.0008s2060 1.0kb downstream 1.0kb downstream 1616 true scaffold_8: 10359904-10361519 Capsella rubella
Carub.0008s2060 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 10359904-10360903 Capsella rubella
Carub.0008s2060 2.0kb upstream 2.0kb upstream 2616 true scaffold_8: 10360904-10363519 Capsella rubella
Carub.0008s2060 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 10361520-10363519 Capsella rubella
Carub.0008s2060 2.0kb downstream 2.0kb downstream 2616 true scaffold_8: 10358904-10361519 Capsella rubella
Carub.0008s2060 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 10358904-10360903 Capsella rubella
Carub.0008s2060 5.0kb upstream 5.0kb upstream 5616 true scaffold_8: 10360904-10366519 Capsella rubella
Carub.0008s2060 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 10361520-10366519 Capsella rubella
Carub.0008s2060 5.0kb downstream 5.0kb downstream 5616 true scaffold_8: 10355904-10361519 Capsella rubella
Carub.0008s2060 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 10355904-10360903 Capsella rubella
Carub.0008s2060 10.0kb upstream 10.0kb upstream 10616 true scaffold_8: 10360904-10371519 Capsella rubella
Carub.0008s2060 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 10361520-10371519 Capsella rubella
Carub.0008s2060 10.0kb downstream 10.0kb downstream 10616 true scaffold_8: 10350904-10361519 Capsella rubella
Carub.0008s2060 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 10350904-10360903 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368268 5261 Brassicaceae View MSA
123835519 5264 Brassicales-Malvales View MSA
124349980 5266 SBM View MSA
124252985 5268 Malvidae View MSA
124061661 5270 Rosid View MSA
123747843 5271 Pentapetalae View MSA
122790614 5272 Eudicot View MSA
122044868 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain