Gene : Carub.0008s2228 C. rubella v1.1
Defline:  (1 of 2) PTHR31677//PTHR31677:SF24 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF106 Genomic Order:  2228
Name:  ? Carub.0008s2228 Secondary Identifier:  ? PAC:39250808
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2228 0.5kb upstream 0.5kb upstream 1103 true scaffold_8: 11048295-11049397 Capsella rubella
Carub.0008s2228 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 11048898-11049397 Capsella rubella
Carub.0008s2228 0.5kb downstream 0.5kb downstream 1103 true scaffold_8: 11047795-11048897 Capsella rubella
Carub.0008s2228 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 11047795-11048294 Capsella rubella
Carub.0008s2228 1.0kb upstream 1.0kb upstream 1603 true scaffold_8: 11048295-11049897 Capsella rubella
Carub.0008s2228 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 11048898-11049897 Capsella rubella
Carub.0008s2228 1.0kb downstream 1.0kb downstream 1603 true scaffold_8: 11047295-11048897 Capsella rubella
Carub.0008s2228 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 11047295-11048294 Capsella rubella
Carub.0008s2228 2.0kb upstream 2.0kb upstream 2603 true scaffold_8: 11048295-11050897 Capsella rubella
Carub.0008s2228 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 11048898-11050897 Capsella rubella
Carub.0008s2228 2.0kb downstream 2.0kb downstream 2603 true scaffold_8: 11046295-11048897 Capsella rubella
Carub.0008s2228 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 11046295-11048294 Capsella rubella
Carub.0008s2228 5.0kb upstream 5.0kb upstream 5603 true scaffold_8: 11048295-11053897 Capsella rubella
Carub.0008s2228 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 11048898-11053897 Capsella rubella
Carub.0008s2228 5.0kb downstream 5.0kb downstream 5603 true scaffold_8: 11043295-11048897 Capsella rubella
Carub.0008s2228 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 11043295-11048294 Capsella rubella
Carub.0008s2228 10.0kb upstream 10.0kb upstream 10603 true scaffold_8: 11048295-11058897 Capsella rubella
Carub.0008s2228 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 11048898-11058897 Capsella rubella
Carub.0008s2228 10.0kb downstream 10.0kb downstream 10603 true scaffold_8: 11038295-11048897 Capsella rubella
Carub.0008s2228 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 11038295-11048294 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370147 5261 Brassicaceae View MSA
123837546 5264 Brassicales-Malvales View MSA
124337526 5266 SBM View MSA
124248001 5268 Malvidae View MSA
124040353 5270 Rosid View MSA
123746238 5271 Pentapetalae View MSA
122796887 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain