Gene : Carub.0008s1411 C. rubella v1.1
Defline:  (1 of 6) 1.1.1.39 - Malate dehydrogenase (decarboxylating) / Pyruvic-malic carboxylase Genomic Order:  1411
Name:  ? Carub.0008s1411 Secondary Identifier:  ? PAC:39251785
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella GLUCONEO-PWY Capsella rubella pathologic  
Crubella PWY-7115 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1411 0.5kb upstream 0.5kb upstream 937 true scaffold_8: 7953862-7954798 Capsella rubella
Carub.0008s1411 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 7953862-7954361 Capsella rubella
Carub.0008s1411 0.5kb downstream 0.5kb downstream 937 true scaffold_8: 7954362-7955298 Capsella rubella
Carub.0008s1411 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 7954799-7955298 Capsella rubella
Carub.0008s1411 1.0kb upstream 1.0kb upstream 1437 true scaffold_8: 7953362-7954798 Capsella rubella
Carub.0008s1411 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 7953362-7954361 Capsella rubella
Carub.0008s1411 1.0kb downstream 1.0kb downstream 1437 true scaffold_8: 7954362-7955798 Capsella rubella
Carub.0008s1411 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 7954799-7955798 Capsella rubella
Carub.0008s1411 2.0kb upstream 2.0kb upstream 2437 true scaffold_8: 7952362-7954798 Capsella rubella
Carub.0008s1411 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 7952362-7954361 Capsella rubella
Carub.0008s1411 2.0kb downstream 2.0kb downstream 2437 true scaffold_8: 7954362-7956798 Capsella rubella
Carub.0008s1411 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 7954799-7956798 Capsella rubella
Carub.0008s1411 5.0kb upstream 5.0kb upstream 5437 true scaffold_8: 7949362-7954798 Capsella rubella
Carub.0008s1411 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 7949362-7954361 Capsella rubella
Carub.0008s1411 5.0kb downstream 5.0kb downstream 5437 true scaffold_8: 7954362-7959798 Capsella rubella
Carub.0008s1411 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 7954799-7959798 Capsella rubella
Carub.0008s1411 10.0kb upstream 10.0kb upstream 10437 true scaffold_8: 7944362-7954798 Capsella rubella
Carub.0008s1411 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 7944362-7954361 Capsella rubella
Carub.0008s1411 10.0kb downstream 10.0kb downstream 10437 true scaffold_8: 7954362-7964798 Capsella rubella
Carub.0008s1411 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 7954799-7964798 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371722 5261 Brassicaceae View MSA
123838955 5264 Brassicales-Malvales View MSA
124337448 5266 SBM View MSA
124248730 5268 Malvidae View MSA
124073264 5270 Rosid View MSA
123749202 5271 Pentapetalae View MSA
122796678 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain