Gene : Carub.0008s1946 C. rubella v1.1

Defline:  (1 of 22) 3.4.21.25 - Cucumisin Genomic Order:  1946
Name:  ? Carub.0008s1946 Secondary Identifier:  ? PAC:39250731

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1946 0.5kb upstream 0.5kb upstream 3546 true scaffold_8: 9962128-9965673 Capsella rubella
Carub.0008s1946 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 9962128-9962627 Capsella rubella
Carub.0008s1946 0.5kb downstream 0.5kb downstream 3546 true scaffold_8: 9962628-9966173 Capsella rubella
Carub.0008s1946 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 9965674-9966173 Capsella rubella
Carub.0008s1946 1.0kb upstream 1.0kb upstream 4046 true scaffold_8: 9961628-9965673 Capsella rubella
Carub.0008s1946 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 9961628-9962627 Capsella rubella
Carub.0008s1946 1.0kb downstream 1.0kb downstream 4046 true scaffold_8: 9962628-9966673 Capsella rubella
Carub.0008s1946 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 9965674-9966673 Capsella rubella
Carub.0008s1946 2.0kb upstream 2.0kb upstream 5046 true scaffold_8: 9960628-9965673 Capsella rubella
Carub.0008s1946 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 9960628-9962627 Capsella rubella
Carub.0008s1946 2.0kb downstream 2.0kb downstream 5046 true scaffold_8: 9962628-9967673 Capsella rubella
Carub.0008s1946 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 9965674-9967673 Capsella rubella
Carub.0008s1946 5.0kb upstream 5.0kb upstream 8046 true scaffold_8: 9957628-9965673 Capsella rubella
Carub.0008s1946 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 9957628-9962627 Capsella rubella
Carub.0008s1946 5.0kb downstream 5.0kb downstream 8046 true scaffold_8: 9962628-9970673 Capsella rubella
Carub.0008s1946 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 9965674-9970673 Capsella rubella
Carub.0008s1946 10.0kb upstream 10.0kb upstream 13046 true scaffold_8: 9952628-9965673 Capsella rubella
Carub.0008s1946 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 9952628-9962627 Capsella rubella
Carub.0008s1946 10.0kb downstream 10.0kb downstream 13046 true scaffold_8: 9962628-9975673 Capsella rubella
Carub.0008s1946 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 9965674-9975673 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380134 5261 Brassicaceae View MSA
123842243 5264 Brassicales-Malvales View MSA
124323345 5266 SBM View MSA
124254110 5268 Malvidae View MSA
124074776 5270 Rosid View MSA
123753606 5271 Pentapetalae View MSA
122797256 5272 Eudicot View MSA
122051606 5273 Angiosperm View MSA
121349729 5274 Embryophyte View MSA
123428602 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain