Gene : Carub.0008s2135 C. rubella v1.1

Defline:  (1 of 3) K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) Genomic Order:  2135
Name:  ? Carub.0008s2135 Secondary Identifier:  ? PAC:39252668

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2135 0.5kb upstream 0.5kb upstream 1698 true scaffold_8: 10633147-10634844 Capsella rubella
Carub.0008s2135 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 10634345-10634844 Capsella rubella
Carub.0008s2135 0.5kb downstream 0.5kb downstream 1698 true scaffold_8: 10632647-10634344 Capsella rubella
Carub.0008s2135 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 10632647-10633146 Capsella rubella
Carub.0008s2135 1.0kb upstream 1.0kb upstream 2198 true scaffold_8: 10633147-10635344 Capsella rubella
Carub.0008s2135 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 10634345-10635344 Capsella rubella
Carub.0008s2135 1.0kb downstream 1.0kb downstream 2198 true scaffold_8: 10632147-10634344 Capsella rubella
Carub.0008s2135 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 10632147-10633146 Capsella rubella
Carub.0008s2135 2.0kb upstream 2.0kb upstream 3198 true scaffold_8: 10633147-10636344 Capsella rubella
Carub.0008s2135 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 10634345-10636344 Capsella rubella
Carub.0008s2135 2.0kb downstream 2.0kb downstream 3198 true scaffold_8: 10631147-10634344 Capsella rubella
Carub.0008s2135 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 10631147-10633146 Capsella rubella
Carub.0008s2135 5.0kb upstream 5.0kb upstream 6198 true scaffold_8: 10633147-10639344 Capsella rubella
Carub.0008s2135 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 10634345-10639344 Capsella rubella
Carub.0008s2135 5.0kb downstream 5.0kb downstream 6198 true scaffold_8: 10628147-10634344 Capsella rubella
Carub.0008s2135 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 10628147-10633146 Capsella rubella
Carub.0008s2135 10.0kb upstream 10.0kb upstream 11198 true scaffold_8: 10633147-10644344 Capsella rubella
Carub.0008s2135 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 10634345-10644344 Capsella rubella
Carub.0008s2135 10.0kb downstream 10.0kb downstream 11198 true scaffold_8: 10623147-10634344 Capsella rubella
Carub.0008s2135 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 10623147-10633146 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378383 5261 Brassicaceae View MSA
123836781 5264 Brassicales-Malvales View MSA
124350930 5266 SBM View MSA
124254626 5268 Malvidae View MSA
124068553 5270 Rosid View MSA
123746729 5271 Pentapetalae View MSA
122788263 5272 Eudicot View MSA
122050201 5273 Angiosperm View MSA
121345263 5274 Embryophyte View MSA
123424135 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain