Gene : Carub.0008s1380 C. rubella v1.1
Defline:  (1 of 12) PTHR31044:SF19 - CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1380
Name:  ? Carub.0008s1380 Secondary Identifier:  ? PAC:39252149
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1380 0.5kb upstream 0.5kb upstream 1546 true scaffold_8: 7860579-7862124 Capsella rubella
Carub.0008s1380 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 7860579-7861078 Capsella rubella
Carub.0008s1380 0.5kb downstream 0.5kb downstream 1546 true scaffold_8: 7861079-7862624 Capsella rubella
Carub.0008s1380 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 7862125-7862624 Capsella rubella
Carub.0008s1380 1.0kb upstream 1.0kb upstream 2046 true scaffold_8: 7860079-7862124 Capsella rubella
Carub.0008s1380 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 7860079-7861078 Capsella rubella
Carub.0008s1380 1.0kb downstream 1.0kb downstream 2046 true scaffold_8: 7861079-7863124 Capsella rubella
Carub.0008s1380 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 7862125-7863124 Capsella rubella
Carub.0008s1380 2.0kb upstream 2.0kb upstream 3046 true scaffold_8: 7859079-7862124 Capsella rubella
Carub.0008s1380 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 7859079-7861078 Capsella rubella
Carub.0008s1380 2.0kb downstream 2.0kb downstream 3046 true scaffold_8: 7861079-7864124 Capsella rubella
Carub.0008s1380 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 7862125-7864124 Capsella rubella
Carub.0008s1380 5.0kb upstream 5.0kb upstream 6046 true scaffold_8: 7856079-7862124 Capsella rubella
Carub.0008s1380 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 7856079-7861078 Capsella rubella
Carub.0008s1380 5.0kb downstream 5.0kb downstream 6046 true scaffold_8: 7861079-7867124 Capsella rubella
Carub.0008s1380 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 7862125-7867124 Capsella rubella
Carub.0008s1380 10.0kb upstream 10.0kb upstream 11046 true scaffold_8: 7851079-7862124 Capsella rubella
Carub.0008s1380 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 7851079-7861078 Capsella rubella
Carub.0008s1380 10.0kb downstream 10.0kb downstream 11046 true scaffold_8: 7861079-7872124 Capsella rubella
Carub.0008s1380 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 7862125-7872124 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376167 5261 Brassicaceae View MSA
123801161 5264 Brassicales-Malvales View MSA
124349799 5266 SBM View MSA
124254045 5268 Malvidae View MSA
124038019 5270 Rosid View MSA
123750670 5271 Pentapetalae View MSA
122789328 5272 Eudicot View MSA
122050272 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121349342 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain