Gene : Carub.0008s1766 C. rubella v1.1
Defline:  (1 of 131) PF00010 - Helix-loop-helix DNA-binding domain (HLH) Genomic Order:  1766
Name:  ? Carub.0008s1766 Secondary Identifier:  ? PAC:39251860
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1766 0.5kb upstream 0.5kb upstream 3077 true scaffold_8: 9311838-9314914 Capsella rubella
Carub.0008s1766 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 9311838-9312337 Capsella rubella
Carub.0008s1766 0.5kb downstream 0.5kb downstream 3077 true scaffold_8: 9312338-9315414 Capsella rubella
Carub.0008s1766 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 9314915-9315414 Capsella rubella
Carub.0008s1766 1.0kb upstream 1.0kb upstream 3577 true scaffold_8: 9311338-9314914 Capsella rubella
Carub.0008s1766 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 9311338-9312337 Capsella rubella
Carub.0008s1766 1.0kb downstream 1.0kb downstream 3577 true scaffold_8: 9312338-9315914 Capsella rubella
Carub.0008s1766 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 9314915-9315914 Capsella rubella
Carub.0008s1766 2.0kb upstream 2.0kb upstream 4577 true scaffold_8: 9310338-9314914 Capsella rubella
Carub.0008s1766 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 9310338-9312337 Capsella rubella
Carub.0008s1766 2.0kb downstream 2.0kb downstream 4577 true scaffold_8: 9312338-9316914 Capsella rubella
Carub.0008s1766 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 9314915-9316914 Capsella rubella
Carub.0008s1766 5.0kb upstream 5.0kb upstream 7577 true scaffold_8: 9307338-9314914 Capsella rubella
Carub.0008s1766 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 9307338-9312337 Capsella rubella
Carub.0008s1766 5.0kb downstream 5.0kb downstream 7577 true scaffold_8: 9312338-9319914 Capsella rubella
Carub.0008s1766 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 9314915-9319914 Capsella rubella
Carub.0008s1766 10.0kb upstream 10.0kb upstream 12577 true scaffold_8: 9302338-9314914 Capsella rubella
Carub.0008s1766 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 9302338-9312337 Capsella rubella
Carub.0008s1766 10.0kb downstream 10.0kb downstream 12577 true scaffold_8: 9312338-9324914 Capsella rubella
Carub.0008s1766 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 9314915-9324914 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371169 5261 Brassicaceae View MSA
123837199 5264 Brassicales-Malvales View MSA
124350275 5266 SBM View MSA
124242382 5268 Malvidae View MSA
124067726 5270 Rosid View MSA
123740187 5271 Pentapetalae View MSA
122797618 5272 Eudicot View MSA
122050016 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain