Gene : Carub.0008s1767 C. rubella v1.1
Defline:  (1 of 1) K10777 - DNA ligase 4 (LIG4, DNL4) Genomic Order:  1767
Name:  ? Carub.0008s1767 Secondary Identifier:  ? PAC:39250369
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1767 0.5kb upstream 0.5kb upstream 7848 true scaffold_8: 9316274-9324121 Capsella rubella
Carub.0008s1767 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 9323622-9324121 Capsella rubella
Carub.0008s1767 0.5kb downstream 0.5kb downstream 7848 true scaffold_8: 9315774-9323621 Capsella rubella
Carub.0008s1767 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 9315774-9316273 Capsella rubella
Carub.0008s1767 1.0kb upstream 1.0kb upstream 8348 true scaffold_8: 9316274-9324621 Capsella rubella
Carub.0008s1767 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 9323622-9324621 Capsella rubella
Carub.0008s1767 1.0kb downstream 1.0kb downstream 8348 true scaffold_8: 9315274-9323621 Capsella rubella
Carub.0008s1767 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 9315274-9316273 Capsella rubella
Carub.0008s1767 2.0kb upstream 2.0kb upstream 9348 true scaffold_8: 9316274-9325621 Capsella rubella
Carub.0008s1767 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 9323622-9325621 Capsella rubella
Carub.0008s1767 2.0kb downstream 2.0kb downstream 9348 true scaffold_8: 9314274-9323621 Capsella rubella
Carub.0008s1767 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 9314274-9316273 Capsella rubella
Carub.0008s1767 5.0kb upstream 5.0kb upstream 12348 true scaffold_8: 9316274-9328621 Capsella rubella
Carub.0008s1767 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 9323622-9328621 Capsella rubella
Carub.0008s1767 5.0kb downstream 5.0kb downstream 12348 true scaffold_8: 9311274-9323621 Capsella rubella
Carub.0008s1767 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 9311274-9316273 Capsella rubella
Carub.0008s1767 10.0kb upstream 10.0kb upstream 17348 true scaffold_8: 9316274-9333621 Capsella rubella
Carub.0008s1767 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 9323622-9333621 Capsella rubella
Carub.0008s1767 10.0kb downstream 10.0kb downstream 17348 true scaffold_8: 9306274-9323621 Capsella rubella
Carub.0008s1767 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 9306274-9316273 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122337030 5261 Brassicaceae Singleton cluster - no MSA
123777711 5264 Brassicales-Malvales Singleton cluster - no MSA
124350738 5266 SBM View MSA
124252693 5268 Malvidae View MSA
124066259 5270 Rosid View MSA
123748643 5271 Pentapetalae View MSA
122787045 5272 Eudicot View MSA
122045949 5273 Angiosperm View MSA
121346093 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain