Gene : Carub.0008s1582 C. rubella v1.1
Defline:  (1 of 6) PTHR23344//PTHR23344:SF8 - GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE // GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE-LIKE PROTEIN-RELATED Genomic Order:  1582
Name:  ? Carub.0008s1582 Secondary Identifier:  ? PAC:39251452
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7409 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1582 0.5kb upstream 0.5kb upstream 4512 true scaffold_8: 8595069-8599580 Capsella rubella
Carub.0008s1582 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 8595069-8595568 Capsella rubella
Carub.0008s1582 0.5kb downstream 0.5kb downstream 4512 true scaffold_8: 8595569-8600080 Capsella rubella
Carub.0008s1582 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 8599581-8600080 Capsella rubella
Carub.0008s1582 1.0kb upstream 1.0kb upstream 5012 true scaffold_8: 8594569-8599580 Capsella rubella
Carub.0008s1582 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 8594569-8595568 Capsella rubella
Carub.0008s1582 1.0kb downstream 1.0kb downstream 5012 true scaffold_8: 8595569-8600580 Capsella rubella
Carub.0008s1582 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 8599581-8600580 Capsella rubella
Carub.0008s1582 2.0kb upstream 2.0kb upstream 6012 true scaffold_8: 8593569-8599580 Capsella rubella
Carub.0008s1582 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 8593569-8595568 Capsella rubella
Carub.0008s1582 2.0kb downstream 2.0kb downstream 6012 true scaffold_8: 8595569-8601580 Capsella rubella
Carub.0008s1582 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 8599581-8601580 Capsella rubella
Carub.0008s1582 5.0kb upstream 5.0kb upstream 9012 true scaffold_8: 8590569-8599580 Capsella rubella
Carub.0008s1582 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 8590569-8595568 Capsella rubella
Carub.0008s1582 5.0kb downstream 5.0kb downstream 9012 true scaffold_8: 8595569-8604580 Capsella rubella
Carub.0008s1582 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 8599581-8604580 Capsella rubella
Carub.0008s1582 10.0kb upstream 10.0kb upstream 14012 true scaffold_8: 8585569-8599580 Capsella rubella
Carub.0008s1582 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 8585569-8595568 Capsella rubella
Carub.0008s1582 10.0kb downstream 10.0kb downstream 14012 true scaffold_8: 8595569-8609580 Capsella rubella
Carub.0008s1582 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 8599581-8609580 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365467 5261 Brassicaceae View MSA
123839797 5264 Brassicales-Malvales View MSA
124343123 5266 SBM View MSA
124245225 5268 Malvidae View MSA
124064633 5270 Rosid View MSA
123747170 5271 Pentapetalae View MSA
122796977 5272 Eudicot View MSA
122046858 5273 Angiosperm View MSA
121349950 5274 Embryophyte View MSA
123381513 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain