Gene : Carub.0008s2165 C. rubella v1.1
Defline:  (1 of 1) PTHR24015//PTHR24015:SF831 - FAMILY NOT NAMED // PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PNM1, MITOCHONDRIAL Genomic Order:  2165
Name:  ? Carub.0008s2165 Secondary Identifier:  ? PAC:39252521
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2165 0.5kb upstream 0.5kb upstream 2350 true scaffold_8: 10787336-10789685 Capsella rubella
Carub.0008s2165 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 10789186-10789685 Capsella rubella
Carub.0008s2165 0.5kb downstream 0.5kb downstream 2350 true scaffold_8: 10786836-10789185 Capsella rubella
Carub.0008s2165 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 10786836-10787335 Capsella rubella
Carub.0008s2165 1.0kb upstream 1.0kb upstream 2850 true scaffold_8: 10787336-10790185 Capsella rubella
Carub.0008s2165 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 10789186-10790185 Capsella rubella
Carub.0008s2165 1.0kb downstream 1.0kb downstream 2850 true scaffold_8: 10786336-10789185 Capsella rubella
Carub.0008s2165 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 10786336-10787335 Capsella rubella
Carub.0008s2165 2.0kb upstream 2.0kb upstream 3850 true scaffold_8: 10787336-10791185 Capsella rubella
Carub.0008s2165 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 10789186-10791185 Capsella rubella
Carub.0008s2165 2.0kb downstream 2.0kb downstream 3850 true scaffold_8: 10785336-10789185 Capsella rubella
Carub.0008s2165 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 10785336-10787335 Capsella rubella
Carub.0008s2165 5.0kb upstream 5.0kb upstream 6850 true scaffold_8: 10787336-10794185 Capsella rubella
Carub.0008s2165 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 10789186-10794185 Capsella rubella
Carub.0008s2165 5.0kb downstream 5.0kb downstream 6850 true scaffold_8: 10782336-10789185 Capsella rubella
Carub.0008s2165 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 10782336-10787335 Capsella rubella
Carub.0008s2165 10.0kb upstream 10.0kb upstream 11850 true scaffold_8: 10787336-10799185 Capsella rubella
Carub.0008s2165 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 10789186-10799185 Capsella rubella
Carub.0008s2165 10.0kb downstream 10.0kb downstream 11850 true scaffold_8: 10777336-10789185 Capsella rubella
Carub.0008s2165 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 10777336-10787335 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364939 5261 Brassicaceae View MSA
123829544 5264 Brassicales-Malvales View MSA
124345462 5266 SBM View MSA
124240258 5268 Malvidae View MSA
124060822 5270 Rosid View MSA
123741492 5271 Pentapetalae View MSA
122788811 5272 Eudicot View MSA
122044715 5273 Angiosperm View MSA
121310333 5274 Embryophyte View MSA
123347846 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain