Gene : Carub.0008s1047 C. rubella v1.1
Defline:  (1 of 1) 5.5.1.9 - Cycloeucalenol cycloisomerase / Cycloeucalenol--obtusifoliol isomerase Genomic Order:  1047
Name:  ? Carub.0008s1047 Secondary Identifier:  ? PAC:39251067
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-2541 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1047 0.5kb upstream 0.5kb upstream 3591 true scaffold_8: 6455911-6459501 Capsella rubella
Carub.0008s1047 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 6455911-6456410 Capsella rubella
Carub.0008s1047 0.5kb downstream 0.5kb downstream 3591 true scaffold_8: 6456411-6460001 Capsella rubella
Carub.0008s1047 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 6459502-6460001 Capsella rubella
Carub.0008s1047 1.0kb upstream 1.0kb upstream 4091 true scaffold_8: 6455411-6459501 Capsella rubella
Carub.0008s1047 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 6455411-6456410 Capsella rubella
Carub.0008s1047 1.0kb downstream 1.0kb downstream 4091 true scaffold_8: 6456411-6460501 Capsella rubella
Carub.0008s1047 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 6459502-6460501 Capsella rubella
Carub.0008s1047 2.0kb upstream 2.0kb upstream 5091 true scaffold_8: 6454411-6459501 Capsella rubella
Carub.0008s1047 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 6454411-6456410 Capsella rubella
Carub.0008s1047 2.0kb downstream 2.0kb downstream 5091 true scaffold_8: 6456411-6461501 Capsella rubella
Carub.0008s1047 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 6459502-6461501 Capsella rubella
Carub.0008s1047 5.0kb upstream 5.0kb upstream 8091 true scaffold_8: 6451411-6459501 Capsella rubella
Carub.0008s1047 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 6451411-6456410 Capsella rubella
Carub.0008s1047 5.0kb downstream 5.0kb downstream 8091 true scaffold_8: 6456411-6464501 Capsella rubella
Carub.0008s1047 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 6459502-6464501 Capsella rubella
Carub.0008s1047 10.0kb upstream 10.0kb upstream 13091 true scaffold_8: 6446411-6459501 Capsella rubella
Carub.0008s1047 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 6446411-6456410 Capsella rubella
Carub.0008s1047 10.0kb downstream 10.0kb downstream 13091 true scaffold_8: 6456411-6469501 Capsella rubella
Carub.0008s1047 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 6459502-6469501 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369624 5261 Brassicaceae View MSA
123840142 5264 Brassicales-Malvales View MSA
124336797 5266 SBM View MSA
124240499 5268 Malvidae View MSA
124063919 5270 Rosid View MSA
123740858 5271 Pentapetalae View MSA
122788085 5272 Eudicot View MSA
122046906 5273 Angiosperm View MSA
121345110 5274 Embryophyte View MSA
123424971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain