Gene : Carub.0008s1478 C. rubella v1.1
Defline:  (1 of 4) K03809 - NAD(P)H dehydrogenase (quinone) (wrbA) Genomic Order:  1478
Name:  ? Carub.0008s1478 Secondary Identifier:  ? PAC:39251106
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7279 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1478 0.5kb upstream 0.5kb upstream 2453 true scaffold_8: 8216400-8218852 Capsella rubella
Carub.0008s1478 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 8216400-8216899 Capsella rubella
Carub.0008s1478 0.5kb downstream 0.5kb downstream 2453 true scaffold_8: 8216900-8219352 Capsella rubella
Carub.0008s1478 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 8218853-8219352 Capsella rubella
Carub.0008s1478 1.0kb upstream 1.0kb upstream 2953 true scaffold_8: 8215900-8218852 Capsella rubella
Carub.0008s1478 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 8215900-8216899 Capsella rubella
Carub.0008s1478 1.0kb downstream 1.0kb downstream 2953 true scaffold_8: 8216900-8219852 Capsella rubella
Carub.0008s1478 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 8218853-8219852 Capsella rubella
Carub.0008s1478 2.0kb upstream 2.0kb upstream 3953 true scaffold_8: 8214900-8218852 Capsella rubella
Carub.0008s1478 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 8214900-8216899 Capsella rubella
Carub.0008s1478 2.0kb downstream 2.0kb downstream 3953 true scaffold_8: 8216900-8220852 Capsella rubella
Carub.0008s1478 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 8218853-8220852 Capsella rubella
Carub.0008s1478 5.0kb upstream 5.0kb upstream 6953 true scaffold_8: 8211900-8218852 Capsella rubella
Carub.0008s1478 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 8211900-8216899 Capsella rubella
Carub.0008s1478 5.0kb downstream 5.0kb downstream 6953 true scaffold_8: 8216900-8223852 Capsella rubella
Carub.0008s1478 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 8218853-8223852 Capsella rubella
Carub.0008s1478 10.0kb upstream 10.0kb upstream 11953 true scaffold_8: 8206900-8218852 Capsella rubella
Carub.0008s1478 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 8206900-8216899 Capsella rubella
Carub.0008s1478 10.0kb downstream 10.0kb downstream 11953 true scaffold_8: 8216900-8228852 Capsella rubella
Carub.0008s1478 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 8218853-8228852 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378142 5261 Brassicaceae View MSA
123837779 5264 Brassicales-Malvales View MSA
124349421 5266 SBM View MSA
124247600 5268 Malvidae View MSA
124066507 5270 Rosid View MSA
123752194 5271 Pentapetalae View MSA
122789717 5272 Eudicot View MSA
122045410 5273 Angiosperm View MSA
121349391 5274 Embryophyte View MSA
123428089 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain