Gene : Carub.0008s1497 C. rubella v1.1
Defline:  (1 of 1) PTHR13268//PTHR13268:SF1 - BREAST CARCINOMA AMPLIFIED SEQUENCE 3 // AUTOPHAGY-RELATED PROTEIN 18F Genomic Order:  1497
Name:  ? Carub.0008s1497 Secondary Identifier:  ? PAC:39252361
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1497 0.5kb upstream 0.5kb upstream 4193 true scaffold_8: 8317398-8321590 Capsella rubella
Carub.0008s1497 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 8321091-8321590 Capsella rubella
Carub.0008s1497 0.5kb downstream 0.5kb downstream 4193 true scaffold_8: 8316898-8321090 Capsella rubella
Carub.0008s1497 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 8316898-8317397 Capsella rubella
Carub.0008s1497 1.0kb upstream 1.0kb upstream 4693 true scaffold_8: 8317398-8322090 Capsella rubella
Carub.0008s1497 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 8321091-8322090 Capsella rubella
Carub.0008s1497 1.0kb downstream 1.0kb downstream 4693 true scaffold_8: 8316398-8321090 Capsella rubella
Carub.0008s1497 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 8316398-8317397 Capsella rubella
Carub.0008s1497 2.0kb upstream 2.0kb upstream 5693 true scaffold_8: 8317398-8323090 Capsella rubella
Carub.0008s1497 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 8321091-8323090 Capsella rubella
Carub.0008s1497 2.0kb downstream 2.0kb downstream 5693 true scaffold_8: 8315398-8321090 Capsella rubella
Carub.0008s1497 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 8315398-8317397 Capsella rubella
Carub.0008s1497 5.0kb upstream 5.0kb upstream 8693 true scaffold_8: 8317398-8326090 Capsella rubella
Carub.0008s1497 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 8321091-8326090 Capsella rubella
Carub.0008s1497 5.0kb downstream 5.0kb downstream 8693 true scaffold_8: 8312398-8321090 Capsella rubella
Carub.0008s1497 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 8312398-8317397 Capsella rubella
Carub.0008s1497 10.0kb upstream 10.0kb upstream 13693 true scaffold_8: 8317398-8331090 Capsella rubella
Carub.0008s1497 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 8321091-8331090 Capsella rubella
Carub.0008s1497 10.0kb downstream 10.0kb downstream 13693 true scaffold_8: 8307398-8321090 Capsella rubella
Carub.0008s1497 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 8307398-8317397 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362831 5261 Brassicaceae View MSA
123835786 5264 Brassicales-Malvales View MSA
124339182 5266 SBM View MSA
124241657 5268 Malvidae View MSA
124067149 5270 Rosid View MSA
123741778 5271 Pentapetalae View MSA
122794061 5272 Eudicot View MSA
122048367 5273 Angiosperm View MSA
121350059 5274 Embryophyte View MSA
123424091 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain