Gene : Carub.0004s0059 C. rubella v1.1
Defline:  (1 of 3) 1.5.1.3//2.1.1.45 - Dihydrofolate reductase / Tetrahydrofolate dehydrogenase // Thymidylate synthase Genomic Order:  59
Name:  ? Carub.0004s0059 Secondary Identifier:  ? PAC:39238689
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-3841 Capsella rubella pathologic  
Crubella PWY-6612 Capsella rubella pathologic  
Crubella PWY-6614 Capsella rubella pathologic  
Crubella PWY-7184 Capsella rubella pathologic  
Crubella PWY-7199 Capsella rubella pathologic  
Crubella PWY-7200 Capsella rubella pathologic  
Crubella PWY-7210 Capsella rubella pathologic  
Crubella PWY-7211 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0059 0.5kb upstream 0.5kb upstream 2920 true scaffold_4: 212021-214940 Capsella rubella
Carub.0004s0059 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 212021-212520 Capsella rubella
Carub.0004s0059 0.5kb downstream 0.5kb downstream 2920 true scaffold_4: 212521-215440 Capsella rubella
Carub.0004s0059 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 214941-215440 Capsella rubella
Carub.0004s0059 1.0kb upstream 1.0kb upstream 3420 true scaffold_4: 211521-214940 Capsella rubella
Carub.0004s0059 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 211521-212520 Capsella rubella
Carub.0004s0059 1.0kb downstream 1.0kb downstream 3420 true scaffold_4: 212521-215940 Capsella rubella
Carub.0004s0059 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 214941-215940 Capsella rubella
Carub.0004s0059 2.0kb upstream 2.0kb upstream 4420 true scaffold_4: 210521-214940 Capsella rubella
Carub.0004s0059 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 210521-212520 Capsella rubella
Carub.0004s0059 2.0kb downstream 2.0kb downstream 4420 true scaffold_4: 212521-216940 Capsella rubella
Carub.0004s0059 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 214941-216940 Capsella rubella
Carub.0004s0059 5.0kb upstream 5.0kb upstream 7420 true scaffold_4: 207521-214940 Capsella rubella
Carub.0004s0059 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 207521-212520 Capsella rubella
Carub.0004s0059 5.0kb downstream 5.0kb downstream 7420 true scaffold_4: 212521-219940 Capsella rubella
Carub.0004s0059 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 214941-219940 Capsella rubella
Carub.0004s0059 10.0kb upstream 10.0kb upstream 12420 true scaffold_4: 202521-214940 Capsella rubella
Carub.0004s0059 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 202521-212520 Capsella rubella
Carub.0004s0059 10.0kb downstream 10.0kb downstream 12420 true scaffold_4: 212521-224940 Capsella rubella
Carub.0004s0059 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 214941-224940 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511096 5273 Angiosperm View MSA
122372187 5261 Brassicaceae View MSA
123800314 5264 Brassicales-Malvales View MSA
124297740 5266 SBM View MSA
124149554 5268 Malvidae View MSA
123875341 5270 Rosid View MSA
123459179 5271 Pentapetalae View MSA
122494574 5272 Eudicot View MSA
120784161 5274 Embryophyte View MSA
122826095 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain