Gene : Carub.0004s0088 C. rubella v1.1
Defline:  (1 of 77) PTHR32410//PTHR32410:SF152 - FAMILY NOT NAMED // C1 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  88
Name:  ? Carub.0004s0088 Secondary Identifier:  ? PAC:39238292
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0088 0.5kb upstream 0.5kb upstream 8297 true scaffold_4: 313739-322035 Capsella rubella
Carub.0004s0088 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 313739-314238 Capsella rubella
Carub.0004s0088 0.5kb downstream 0.5kb downstream 8297 true scaffold_4: 314239-322535 Capsella rubella
Carub.0004s0088 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 322036-322535 Capsella rubella
Carub.0004s0088 1.0kb upstream 1.0kb upstream 8797 true scaffold_4: 313239-322035 Capsella rubella
Carub.0004s0088 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 313239-314238 Capsella rubella
Carub.0004s0088 1.0kb downstream 1.0kb downstream 8797 true scaffold_4: 314239-323035 Capsella rubella
Carub.0004s0088 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 322036-323035 Capsella rubella
Carub.0004s0088 2.0kb upstream 2.0kb upstream 9797 true scaffold_4: 312239-322035 Capsella rubella
Carub.0004s0088 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 312239-314238 Capsella rubella
Carub.0004s0088 2.0kb downstream 2.0kb downstream 9797 true scaffold_4: 314239-324035 Capsella rubella
Carub.0004s0088 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 322036-324035 Capsella rubella
Carub.0004s0088 5.0kb upstream 5.0kb upstream 12797 true scaffold_4: 309239-322035 Capsella rubella
Carub.0004s0088 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 309239-314238 Capsella rubella
Carub.0004s0088 5.0kb downstream 5.0kb downstream 12797 true scaffold_4: 314239-327035 Capsella rubella
Carub.0004s0088 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 322036-327035 Capsella rubella
Carub.0004s0088 10.0kb upstream 10.0kb upstream 17797 true scaffold_4: 304239-322035 Capsella rubella
Carub.0004s0088 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 304239-314238 Capsella rubella
Carub.0004s0088 10.0kb downstream 10.0kb downstream 17797 true scaffold_4: 314239-332035 Capsella rubella
Carub.0004s0088 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 322036-332035 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377625 5261 Brassicaceae View MSA
123832693 5264 Brassicales-Malvales View MSA
124350505 5266 SBM View MSA
124245070 5268 Malvidae View MSA
124070692 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain