Gene : Carub.0004s0110 C. rubella v1.1
Defline:  (1 of 1) PTHR33471:SF5 - EXPRESSED PROTEIN Genomic Order:  110
Name:  ? Carub.0004s0110 Secondary Identifier:  ? PAC:39237120
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0110 0.5kb upstream 0.5kb upstream 2721 true scaffold_4: 393331-396051 Capsella rubella
Carub.0004s0110 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 393331-393830 Capsella rubella
Carub.0004s0110 0.5kb downstream 0.5kb downstream 2721 true scaffold_4: 393831-396551 Capsella rubella
Carub.0004s0110 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 396052-396551 Capsella rubella
Carub.0004s0110 1.0kb upstream 1.0kb upstream 3221 true scaffold_4: 392831-396051 Capsella rubella
Carub.0004s0110 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 392831-393830 Capsella rubella
Carub.0004s0110 1.0kb downstream 1.0kb downstream 3221 true scaffold_4: 393831-397051 Capsella rubella
Carub.0004s0110 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 396052-397051 Capsella rubella
Carub.0004s0110 2.0kb upstream 2.0kb upstream 4221 true scaffold_4: 391831-396051 Capsella rubella
Carub.0004s0110 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 391831-393830 Capsella rubella
Carub.0004s0110 2.0kb downstream 2.0kb downstream 4221 true scaffold_4: 393831-398051 Capsella rubella
Carub.0004s0110 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 396052-398051 Capsella rubella
Carub.0004s0110 5.0kb upstream 5.0kb upstream 7221 true scaffold_4: 388831-396051 Capsella rubella
Carub.0004s0110 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 388831-393830 Capsella rubella
Carub.0004s0110 5.0kb downstream 5.0kb downstream 7221 true scaffold_4: 393831-401051 Capsella rubella
Carub.0004s0110 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 396052-401051 Capsella rubella
Carub.0004s0110 10.0kb upstream 10.0kb upstream 12221 true scaffold_4: 383831-396051 Capsella rubella
Carub.0004s0110 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 383831-393830 Capsella rubella
Carub.0004s0110 10.0kb downstream 10.0kb downstream 12221 true scaffold_4: 393831-406051 Capsella rubella
Carub.0004s0110 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 396052-406051 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026537 5273 Angiosperm View MSA
122365709 5261 Brassicaceae View MSA
123828150 5264 Brassicales-Malvales View MSA
124337856 5266 SBM View MSA
124241290 5268 Malvidae View MSA
124062959 5270 Rosid View MSA
123740004 5271 Pentapetalae View MSA
122793582 5272 Eudicot View MSA
121345854 5274 Embryophyte View MSA
123426858 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain