Gene : Carub.0004s0190 C. rubella v1.1
Defline:  (1 of 1) PTHR23042:SF25 - TRANSCRIPTION FACTOR NAI1 Genomic Order:  190
Name:  ? Carub.0004s0190 Secondary Identifier:  ? PAC:39238704
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0190 0.5kb upstream 0.5kb upstream 2105 true scaffold_4: 759474-761578 Capsella rubella
Carub.0004s0190 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 759474-759973 Capsella rubella
Carub.0004s0190 0.5kb downstream 0.5kb downstream 2105 true scaffold_4: 759974-762078 Capsella rubella
Carub.0004s0190 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 761579-762078 Capsella rubella
Carub.0004s0190 1.0kb upstream 1.0kb upstream 2605 true scaffold_4: 758974-761578 Capsella rubella
Carub.0004s0190 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 758974-759973 Capsella rubella
Carub.0004s0190 1.0kb downstream 1.0kb downstream 2605 true scaffold_4: 759974-762578 Capsella rubella
Carub.0004s0190 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 761579-762578 Capsella rubella
Carub.0004s0190 2.0kb upstream 2.0kb upstream 3605 true scaffold_4: 757974-761578 Capsella rubella
Carub.0004s0190 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 757974-759973 Capsella rubella
Carub.0004s0190 2.0kb downstream 2.0kb downstream 3605 true scaffold_4: 759974-763578 Capsella rubella
Carub.0004s0190 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 761579-763578 Capsella rubella
Carub.0004s0190 5.0kb upstream 5.0kb upstream 6605 true scaffold_4: 754974-761578 Capsella rubella
Carub.0004s0190 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 754974-759973 Capsella rubella
Carub.0004s0190 5.0kb downstream 5.0kb downstream 6605 true scaffold_4: 759974-766578 Capsella rubella
Carub.0004s0190 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 761579-766578 Capsella rubella
Carub.0004s0190 10.0kb upstream 10.0kb upstream 11605 true scaffold_4: 749974-761578 Capsella rubella
Carub.0004s0190 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 749974-759973 Capsella rubella
Carub.0004s0190 10.0kb downstream 10.0kb downstream 11605 true scaffold_4: 759974-771578 Capsella rubella
Carub.0004s0190 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 761579-771578 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369629 5261 Brassicaceae View MSA
123799813 5264 Brassicales-Malvales View MSA
124297296 5266 SBM View MSA
124149225 5268 Malvidae View MSA
124070459 5270 Rosid View MSA
123749435 5271 Pentapetalae View MSA
122795103 5272 Eudicot View MSA
122042005 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain