Gene : Carub.0006s0626 C. rubella v1.1
Defline:  (1 of 3) PTHR10857//PTHR10857:SF26 - COPINE // PROTEIN BONZAI 3 Genomic Order:  626
Name:  ? Carub.0006s0626 Secondary Identifier:  ? PAC:39248669
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0626 0.5kb upstream 0.5kb upstream 3986 true scaffold_6: 2296632-2300617 Capsella rubella
Carub.0006s0626 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2296632-2297131 Capsella rubella
Carub.0006s0626 0.5kb downstream 0.5kb downstream 3986 true scaffold_6: 2297132-2301117 Capsella rubella
Carub.0006s0626 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2300618-2301117 Capsella rubella
Carub.0006s0626 1.0kb upstream 1.0kb upstream 4486 true scaffold_6: 2296132-2300617 Capsella rubella
Carub.0006s0626 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2296132-2297131 Capsella rubella
Carub.0006s0626 1.0kb downstream 1.0kb downstream 4486 true scaffold_6: 2297132-2301617 Capsella rubella
Carub.0006s0626 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2300618-2301617 Capsella rubella
Carub.0006s0626 2.0kb upstream 2.0kb upstream 5486 true scaffold_6: 2295132-2300617 Capsella rubella
Carub.0006s0626 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2295132-2297131 Capsella rubella
Carub.0006s0626 2.0kb downstream 2.0kb downstream 5486 true scaffold_6: 2297132-2302617 Capsella rubella
Carub.0006s0626 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2300618-2302617 Capsella rubella
Carub.0006s0626 5.0kb upstream 5.0kb upstream 8486 true scaffold_6: 2292132-2300617 Capsella rubella
Carub.0006s0626 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2292132-2297131 Capsella rubella
Carub.0006s0626 5.0kb downstream 5.0kb downstream 8486 true scaffold_6: 2297132-2305617 Capsella rubella
Carub.0006s0626 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2300618-2305617 Capsella rubella
Carub.0006s0626 10.0kb upstream 10.0kb upstream 13486 true scaffold_6: 2287132-2300617 Capsella rubella
Carub.0006s0626 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2287132-2297131 Capsella rubella
Carub.0006s0626 10.0kb downstream 10.0kb downstream 13486 true scaffold_6: 2297132-2310617 Capsella rubella
Carub.0006s0626 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2300618-2310617 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376204 5261 Brassicaceae View MSA
123837759 5264 Brassicales-Malvales View MSA
124322350 5266 SBM View MSA
124249800 5268 Malvidae View MSA
124064124 5270 Rosid View MSA
123745064 5271 Pentapetalae View MSA
122788484 5272 Eudicot View MSA
122043843 5273 Angiosperm View MSA
121351001 5274 Embryophyte View MSA
123424570 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain