Gene : Carub.0004s0133 C. rubella v1.1
Defline:  (1 of 3) PTHR31718//PTHR31718:SF0 - FAMILY NOT NAMED // EXPRESSED PROTEIN-RELATED Genomic Order:  133
Name:  ? Carub.0004s0133 Secondary Identifier:  ? PAC:39237970
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0133 0.5kb upstream 0.5kb upstream 1507 true scaffold_4: 477143-478649 Capsella rubella
Carub.0004s0133 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 478150-478649 Capsella rubella
Carub.0004s0133 0.5kb downstream 0.5kb downstream 1507 true scaffold_4: 476643-478149 Capsella rubella
Carub.0004s0133 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 476643-477142 Capsella rubella
Carub.0004s0133 1.0kb upstream 1.0kb upstream 2007 true scaffold_4: 477143-479149 Capsella rubella
Carub.0004s0133 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 478150-479149 Capsella rubella
Carub.0004s0133 1.0kb downstream 1.0kb downstream 2007 true scaffold_4: 476143-478149 Capsella rubella
Carub.0004s0133 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 476143-477142 Capsella rubella
Carub.0004s0133 2.0kb upstream 2.0kb upstream 3007 true scaffold_4: 477143-480149 Capsella rubella
Carub.0004s0133 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 478150-480149 Capsella rubella
Carub.0004s0133 2.0kb downstream 2.0kb downstream 3007 true scaffold_4: 475143-478149 Capsella rubella
Carub.0004s0133 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 475143-477142 Capsella rubella
Carub.0004s0133 5.0kb upstream 5.0kb upstream 6007 true scaffold_4: 477143-483149 Capsella rubella
Carub.0004s0133 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 478150-483149 Capsella rubella
Carub.0004s0133 5.0kb downstream 5.0kb downstream 6007 true scaffold_4: 472143-478149 Capsella rubella
Carub.0004s0133 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 472143-477142 Capsella rubella
Carub.0004s0133 10.0kb upstream 10.0kb upstream 11007 true scaffold_4: 477143-488149 Capsella rubella
Carub.0004s0133 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 478150-488149 Capsella rubella
Carub.0004s0133 10.0kb downstream 10.0kb downstream 11007 true scaffold_4: 467143-478149 Capsella rubella
Carub.0004s0133 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 467143-477142 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364478 5261 Brassicaceae View MSA
123838840 5264 Brassicales-Malvales View MSA
124342164 5266 SBM View MSA
124247430 5268 Malvidae View MSA
124065222 5270 Rosid View MSA
123742861 5271 Pentapetalae View MSA
122790879 5272 Eudicot View MSA
122048242 5273 Angiosperm View MSA
121351079 5274 Embryophyte View MSA
123381999 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain