Gene : Carub.0006s0622 C. rubella v1.1
Defline:  (1 of 1) PTHR24326:SF187 - HOMEODOMAIN PROTEIN-RELATED Genomic Order:  622
Name:  ? Carub.0006s0622 Secondary Identifier:  ? PAC:39248169
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0622 0.5kb upstream 0.5kb upstream 3388 true scaffold_6: 2273309-2276696 Capsella rubella
Carub.0006s0622 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2273309-2273808 Capsella rubella
Carub.0006s0622 0.5kb downstream 0.5kb downstream 3388 true scaffold_6: 2273809-2277196 Capsella rubella
Carub.0006s0622 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2276697-2277196 Capsella rubella
Carub.0006s0622 1.0kb upstream 1.0kb upstream 3888 true scaffold_6: 2272809-2276696 Capsella rubella
Carub.0006s0622 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2272809-2273808 Capsella rubella
Carub.0006s0622 1.0kb downstream 1.0kb downstream 3888 true scaffold_6: 2273809-2277696 Capsella rubella
Carub.0006s0622 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2276697-2277696 Capsella rubella
Carub.0006s0622 2.0kb upstream 2.0kb upstream 4888 true scaffold_6: 2271809-2276696 Capsella rubella
Carub.0006s0622 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2271809-2273808 Capsella rubella
Carub.0006s0622 2.0kb downstream 2.0kb downstream 4888 true scaffold_6: 2273809-2278696 Capsella rubella
Carub.0006s0622 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2276697-2278696 Capsella rubella
Carub.0006s0622 5.0kb upstream 5.0kb upstream 7888 true scaffold_6: 2268809-2276696 Capsella rubella
Carub.0006s0622 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2268809-2273808 Capsella rubella
Carub.0006s0622 5.0kb downstream 5.0kb downstream 7888 true scaffold_6: 2273809-2281696 Capsella rubella
Carub.0006s0622 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2276697-2281696 Capsella rubella
Carub.0006s0622 10.0kb upstream 10.0kb upstream 12888 true scaffold_6: 2263809-2276696 Capsella rubella
Carub.0006s0622 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2263809-2273808 Capsella rubella
Carub.0006s0622 10.0kb downstream 10.0kb downstream 12888 true scaffold_6: 2273809-2286696 Capsella rubella
Carub.0006s0622 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2276697-2286696 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121502581 5273 Angiosperm View MSA
122343098 5261 Brassicaceae View MSA
123783397 5264 Brassicales-Malvales View MSA
124281632 5266 SBM View MSA
124136356 5268 Malvidae View MSA
123864230 5270 Rosid View MSA
123449563 5271 Pentapetalae View MSA
122485095 5272 Eudicot View MSA
120775891 5274 Embryophyte View MSA
122818182 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain