Gene : Carub.0004s0040 C. rubella v1.1

Defline:  (1 of 1) 2.7.1.51 - L-fuculokinase Genomic Order:  40
Name:  ? Carub.0004s0040 Secondary Identifier:  ? PAC:39238135

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0040 0.5kb upstream 0.5kb upstream 3336 true scaffold_4: 126844-130179 Capsella rubella
Carub.0004s0040 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 129680-130179 Capsella rubella
Carub.0004s0040 0.5kb downstream 0.5kb downstream 3336 true scaffold_4: 126344-129679 Capsella rubella
Carub.0004s0040 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 126344-126843 Capsella rubella
Carub.0004s0040 1.0kb upstream 1.0kb upstream 3836 true scaffold_4: 126844-130679 Capsella rubella
Carub.0004s0040 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 129680-130679 Capsella rubella
Carub.0004s0040 1.0kb downstream 1.0kb downstream 3836 true scaffold_4: 125844-129679 Capsella rubella
Carub.0004s0040 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 125844-126843 Capsella rubella
Carub.0004s0040 2.0kb upstream 2.0kb upstream 4836 true scaffold_4: 126844-131679 Capsella rubella
Carub.0004s0040 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 129680-131679 Capsella rubella
Carub.0004s0040 2.0kb downstream 2.0kb downstream 4836 true scaffold_4: 124844-129679 Capsella rubella
Carub.0004s0040 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 124844-126843 Capsella rubella
Carub.0004s0040 5.0kb upstream 5.0kb upstream 7836 true scaffold_4: 126844-134679 Capsella rubella
Carub.0004s0040 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 129680-134679 Capsella rubella
Carub.0004s0040 5.0kb downstream 5.0kb downstream 7836 true scaffold_4: 121844-129679 Capsella rubella
Carub.0004s0040 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 121844-126843 Capsella rubella
Carub.0004s0040 10.0kb upstream 10.0kb upstream 12836 true scaffold_4: 126844-139679 Capsella rubella
Carub.0004s0040 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 129680-139679 Capsella rubella
Carub.0004s0040 10.0kb downstream 10.0kb downstream 12836 true scaffold_4: 116844-129679 Capsella rubella
Carub.0004s0040 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 116844-126843 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369006 5261 Brassicaceae View MSA
123837469 5264 Brassicales-Malvales View MSA
124337087 5266 SBM View MSA
124241604 5268 Malvidae View MSA
124062389 5270 Rosid View MSA
123737469 5271 Pentapetalae View MSA
122788278 5272 Eudicot View MSA
122044268 5273 Angiosperm View MSA
121310263 5274 Embryophyte View MSA
123425249 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain