Gene : Carub.0008s2641 C. rubella v1.1
Defline:  (1 of 41) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  2641
Name:  ? Carub.0008s2641 Secondary Identifier:  ? PAC:39251628
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2641 0.5kb upstream 0.5kb upstream 4041 true scaffold_8: 12570951-12574991 Capsella rubella
Carub.0008s2641 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 12574492-12574991 Capsella rubella
Carub.0008s2641 0.5kb downstream 0.5kb downstream 4041 true scaffold_8: 12570451-12574491 Capsella rubella
Carub.0008s2641 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 12570451-12570950 Capsella rubella
Carub.0008s2641 1.0kb upstream 1.0kb upstream 4541 true scaffold_8: 12570951-12575491 Capsella rubella
Carub.0008s2641 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 12574492-12575491 Capsella rubella
Carub.0008s2641 1.0kb downstream 1.0kb downstream 4541 true scaffold_8: 12569951-12574491 Capsella rubella
Carub.0008s2641 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 12569951-12570950 Capsella rubella
Carub.0008s2641 2.0kb upstream 2.0kb upstream 5541 true scaffold_8: 12570951-12576491 Capsella rubella
Carub.0008s2641 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 12574492-12576491 Capsella rubella
Carub.0008s2641 2.0kb downstream 2.0kb downstream 5541 true scaffold_8: 12568951-12574491 Capsella rubella
Carub.0008s2641 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 12568951-12570950 Capsella rubella
Carub.0008s2641 5.0kb upstream 5.0kb upstream 8541 true scaffold_8: 12570951-12579491 Capsella rubella
Carub.0008s2641 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 12574492-12579491 Capsella rubella
Carub.0008s2641 5.0kb downstream 5.0kb downstream 8541 true scaffold_8: 12565951-12574491 Capsella rubella
Carub.0008s2641 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 12565951-12570950 Capsella rubella
Carub.0008s2641 10.0kb upstream 10.0kb upstream 13541 true scaffold_8: 12570951-12584491 Capsella rubella
Carub.0008s2641 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 12574492-12584491 Capsella rubella
Carub.0008s2641 10.0kb downstream 10.0kb downstream 13541 true scaffold_8: 12560951-12574491 Capsella rubella
Carub.0008s2641 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 12560951-12570950 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361494 5261 Brassicaceae View MSA
123831043 5264 Brassicales-Malvales View MSA
124341823 5266 SBM View MSA
124250395 5268 Malvidae View MSA
124069371 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain