Gene : Carub.0008s2775 C. rubella v1.1
Defline:  (1 of 2) K00234 - succinate dehydrogenase (ubiquinone) flavoprotein subunit (SDHA, SDH1) Genomic Order:  2775
Name:  ? Carub.0008s2775 Secondary Identifier:  ? PAC:39251305
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-3781 Capsella rubella pathologic  
Crubella PWY-4302 Capsella rubella pathologic  
Crubella PWY-5464 Capsella rubella pathologic  
Crubella PWY-561 Capsella rubella pathologic  
Crubella PWY-5690 Capsella rubella pathologic  
Crubella PWY-7279 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2775 0.5kb upstream 0.5kb upstream 4332 true scaffold_8: 13061482-13065813 Capsella rubella
Carub.0008s2775 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 13061482-13061981 Capsella rubella
Carub.0008s2775 0.5kb downstream 0.5kb downstream 4332 true scaffold_8: 13061982-13066313 Capsella rubella
Carub.0008s2775 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 13065814-13066313 Capsella rubella
Carub.0008s2775 1.0kb upstream 1.0kb upstream 4832 true scaffold_8: 13060982-13065813 Capsella rubella
Carub.0008s2775 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 13060982-13061981 Capsella rubella
Carub.0008s2775 1.0kb downstream 1.0kb downstream 4832 true scaffold_8: 13061982-13066813 Capsella rubella
Carub.0008s2775 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 13065814-13066813 Capsella rubella
Carub.0008s2775 2.0kb upstream 2.0kb upstream 5832 true scaffold_8: 13059982-13065813 Capsella rubella
Carub.0008s2775 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 13059982-13061981 Capsella rubella
Carub.0008s2775 2.0kb downstream 2.0kb downstream 5832 true scaffold_8: 13061982-13067813 Capsella rubella
Carub.0008s2775 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 13065814-13067813 Capsella rubella
Carub.0008s2775 5.0kb upstream 5.0kb upstream 8832 true scaffold_8: 13056982-13065813 Capsella rubella
Carub.0008s2775 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 13056982-13061981 Capsella rubella
Carub.0008s2775 5.0kb downstream 5.0kb downstream 8832 true scaffold_8: 13061982-13070813 Capsella rubella
Carub.0008s2775 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 13065814-13070813 Capsella rubella
Carub.0008s2775 10.0kb upstream 10.0kb upstream 13832 true scaffold_8: 13051982-13065813 Capsella rubella
Carub.0008s2775 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 13051982-13061981 Capsella rubella
Carub.0008s2775 10.0kb downstream 10.0kb downstream 13832 true scaffold_8: 13061982-13075813 Capsella rubella
Carub.0008s2775 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 13065814-13075813 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372416 5261 Brassicaceae View MSA
123827742 5264 Brassicales-Malvales View MSA
124339577 5266 SBM View MSA
124254053 5268 Malvidae View MSA
124063356 5270 Rosid View MSA
123753034 5271 Pentapetalae View MSA
122790960 5272 Eudicot View MSA
122043363 5273 Angiosperm View MSA
121346345 5274 Embryophyte View MSA
123424943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain