Gene : Carub.0008s2782 C. rubella v1.1
Defline:  (1 of 1) K12670 - oligosaccharyltransferase complex subunit beta (WBP1) Genomic Order:  2782
Name:  ? Carub.0008s2782 Secondary Identifier:  ? PAC:39250684
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2782 0.5kb upstream 0.5kb upstream 3478 true scaffold_8: 13095840-13099317 Capsella rubella
Carub.0008s2782 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 13095840-13096339 Capsella rubella
Carub.0008s2782 0.5kb downstream 0.5kb downstream 3478 true scaffold_8: 13096340-13099817 Capsella rubella
Carub.0008s2782 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 13099318-13099817 Capsella rubella
Carub.0008s2782 1.0kb upstream 1.0kb upstream 3978 true scaffold_8: 13095340-13099317 Capsella rubella
Carub.0008s2782 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 13095340-13096339 Capsella rubella
Carub.0008s2782 1.0kb downstream 1.0kb downstream 3978 true scaffold_8: 13096340-13100317 Capsella rubella
Carub.0008s2782 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 13099318-13100317 Capsella rubella
Carub.0008s2782 2.0kb upstream 2.0kb upstream 4978 true scaffold_8: 13094340-13099317 Capsella rubella
Carub.0008s2782 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 13094340-13096339 Capsella rubella
Carub.0008s2782 2.0kb downstream 2.0kb downstream 4978 true scaffold_8: 13096340-13101317 Capsella rubella
Carub.0008s2782 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 13099318-13101317 Capsella rubella
Carub.0008s2782 5.0kb upstream 5.0kb upstream 7978 true scaffold_8: 13091340-13099317 Capsella rubella
Carub.0008s2782 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 13091340-13096339 Capsella rubella
Carub.0008s2782 5.0kb downstream 5.0kb downstream 7978 true scaffold_8: 13096340-13104317 Capsella rubella
Carub.0008s2782 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 13099318-13104317 Capsella rubella
Carub.0008s2782 10.0kb upstream 10.0kb upstream 12978 true scaffold_8: 13086340-13099317 Capsella rubella
Carub.0008s2782 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 13086340-13096339 Capsella rubella
Carub.0008s2782 10.0kb downstream 10.0kb downstream 12978 true scaffold_8: 13096340-13109317 Capsella rubella
Carub.0008s2782 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 13099318-13109317 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360352 5261 Brassicaceae View MSA
123840413 5264 Brassicales-Malvales View MSA
124344226 5266 SBM View MSA
124247082 5268 Malvidae View MSA
124068275 5270 Rosid View MSA
123750728 5271 Pentapetalae View MSA
122793398 5272 Eudicot View MSA
122043093 5273 Angiosperm View MSA
121346216 5274 Embryophyte View MSA
123424757 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain