Gene : Carub.0008s2607 C. rubella v1.1
Defline:  (1 of 2) PTHR22952//PTHR22952:SF180 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // TRANSCRIPTION FACTOR TGA1-RELATED Genomic Order:  2607
Name:  ? Carub.0008s2607 Secondary Identifier:  ? PAC:39253146
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2607 0.5kb upstream 0.5kb upstream 3691 true scaffold_8: 12433007-12436697 Capsella rubella
Carub.0008s2607 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 12433007-12433506 Capsella rubella
Carub.0008s2607 0.5kb downstream 0.5kb downstream 3691 true scaffold_8: 12433507-12437197 Capsella rubella
Carub.0008s2607 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 12436698-12437197 Capsella rubella
Carub.0008s2607 1.0kb upstream 1.0kb upstream 4191 true scaffold_8: 12432507-12436697 Capsella rubella
Carub.0008s2607 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 12432507-12433506 Capsella rubella
Carub.0008s2607 1.0kb downstream 1.0kb downstream 4191 true scaffold_8: 12433507-12437697 Capsella rubella
Carub.0008s2607 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 12436698-12437697 Capsella rubella
Carub.0008s2607 2.0kb upstream 2.0kb upstream 5191 true scaffold_8: 12431507-12436697 Capsella rubella
Carub.0008s2607 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 12431507-12433506 Capsella rubella
Carub.0008s2607 2.0kb downstream 2.0kb downstream 5191 true scaffold_8: 12433507-12438697 Capsella rubella
Carub.0008s2607 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 12436698-12438697 Capsella rubella
Carub.0008s2607 5.0kb upstream 5.0kb upstream 8191 true scaffold_8: 12428507-12436697 Capsella rubella
Carub.0008s2607 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 12428507-12433506 Capsella rubella
Carub.0008s2607 5.0kb downstream 5.0kb downstream 8191 true scaffold_8: 12433507-12441697 Capsella rubella
Carub.0008s2607 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 12436698-12441697 Capsella rubella
Carub.0008s2607 10.0kb upstream 10.0kb upstream 13191 true scaffold_8: 12423507-12436697 Capsella rubella
Carub.0008s2607 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 12423507-12433506 Capsella rubella
Carub.0008s2607 10.0kb downstream 10.0kb downstream 13191 true scaffold_8: 12433507-12446697 Capsella rubella
Carub.0008s2607 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 12436698-12446697 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368508 5261 Brassicaceae View MSA
123841519 5264 Brassicales-Malvales View MSA
124336651 5266 SBM View MSA
124237521 5268 Malvidae View MSA
124071998 5270 Rosid View MSA
123743683 5271 Pentapetalae View MSA
122792849 5272 Eudicot View MSA
122045464 5273 Angiosperm View MSA
121310452 5274 Embryophyte View MSA
123347930 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain