Gene : Carub.0008s2617 C. rubella v1.1

Defline:  (1 of 1) PTHR21355//PTHR21355:SF0 - UNCHARACTERIZED // LMBR1 DOMAIN-CONTAINING PROTEIN 2 Genomic Order:  2617
Name:  ? Carub.0008s2617 Secondary Identifier:  ? PAC:39251430

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2617 0.5kb upstream 0.5kb upstream 5577 true scaffold_8: 12461588-12467164 Capsella rubella
Carub.0008s2617 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 12461588-12462087 Capsella rubella
Carub.0008s2617 0.5kb downstream 0.5kb downstream 5577 true scaffold_8: 12462088-12467664 Capsella rubella
Carub.0008s2617 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 12467165-12467664 Capsella rubella
Carub.0008s2617 1.0kb upstream 1.0kb upstream 6077 true scaffold_8: 12461088-12467164 Capsella rubella
Carub.0008s2617 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 12461088-12462087 Capsella rubella
Carub.0008s2617 1.0kb downstream 1.0kb downstream 6077 true scaffold_8: 12462088-12468164 Capsella rubella
Carub.0008s2617 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 12467165-12468164 Capsella rubella
Carub.0008s2617 2.0kb upstream 2.0kb upstream 7077 true scaffold_8: 12460088-12467164 Capsella rubella
Carub.0008s2617 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 12460088-12462087 Capsella rubella
Carub.0008s2617 2.0kb downstream 2.0kb downstream 7077 true scaffold_8: 12462088-12469164 Capsella rubella
Carub.0008s2617 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 12467165-12469164 Capsella rubella
Carub.0008s2617 5.0kb upstream 5.0kb upstream 10077 true scaffold_8: 12457088-12467164 Capsella rubella
Carub.0008s2617 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 12457088-12462087 Capsella rubella
Carub.0008s2617 5.0kb downstream 5.0kb downstream 10077 true scaffold_8: 12462088-12472164 Capsella rubella
Carub.0008s2617 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 12467165-12472164 Capsella rubella
Carub.0008s2617 10.0kb upstream 10.0kb upstream 15077 true scaffold_8: 12452088-12467164 Capsella rubella
Carub.0008s2617 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 12452088-12462087 Capsella rubella
Carub.0008s2617 10.0kb downstream 10.0kb downstream 15077 true scaffold_8: 12462088-12477164 Capsella rubella
Carub.0008s2617 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 12467165-12477164 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360302 5261 Brassicaceae View MSA
123839994 5264 Brassicales-Malvales View MSA
124337853 5266 SBM View MSA
124242898 5268 Malvidae View MSA
124066630 5270 Rosid View MSA
123751188 5271 Pentapetalae View MSA
122786187 5272 Eudicot View MSA
122043749 5273 Angiosperm View MSA
121346120 5274 Embryophyte View MSA
123425964 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain