Gene : Carub.0008s2351 C. rubella v1.1
Defline:  (1 of 1) 1.1.1.267 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase / DXP-reductoisomerase Genomic Order:  2351
Name:  ? Carub.0008s2351 Secondary Identifier:  ? PAC:39251177
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7560 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2351 0.5kb upstream 0.5kb upstream 3661 true scaffold_8: 11543267-11546927 Capsella rubella
Carub.0008s2351 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 11546428-11546927 Capsella rubella
Carub.0008s2351 0.5kb downstream 0.5kb downstream 3661 true scaffold_8: 11542767-11546427 Capsella rubella
Carub.0008s2351 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 11542767-11543266 Capsella rubella
Carub.0008s2351 1.0kb upstream 1.0kb upstream 4161 true scaffold_8: 11543267-11547427 Capsella rubella
Carub.0008s2351 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 11546428-11547427 Capsella rubella
Carub.0008s2351 1.0kb downstream 1.0kb downstream 4161 true scaffold_8: 11542267-11546427 Capsella rubella
Carub.0008s2351 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 11542267-11543266 Capsella rubella
Carub.0008s2351 2.0kb upstream 2.0kb upstream 5161 true scaffold_8: 11543267-11548427 Capsella rubella
Carub.0008s2351 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 11546428-11548427 Capsella rubella
Carub.0008s2351 2.0kb downstream 2.0kb downstream 5161 true scaffold_8: 11541267-11546427 Capsella rubella
Carub.0008s2351 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 11541267-11543266 Capsella rubella
Carub.0008s2351 5.0kb upstream 5.0kb upstream 8161 true scaffold_8: 11543267-11551427 Capsella rubella
Carub.0008s2351 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 11546428-11551427 Capsella rubella
Carub.0008s2351 5.0kb downstream 5.0kb downstream 8161 true scaffold_8: 11538267-11546427 Capsella rubella
Carub.0008s2351 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 11538267-11543266 Capsella rubella
Carub.0008s2351 10.0kb upstream 10.0kb upstream 13161 true scaffold_8: 11543267-11556427 Capsella rubella
Carub.0008s2351 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 11546428-11556427 Capsella rubella
Carub.0008s2351 10.0kb downstream 10.0kb downstream 13161 true scaffold_8: 11533267-11546427 Capsella rubella
Carub.0008s2351 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 11533267-11543266 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041406 5273 Angiosperm View MSA
122375878 5261 Brassicaceae View MSA
123827755 5264 Brassicales-Malvales View MSA
124341581 5266 SBM View MSA
124238446 5268 Malvidae View MSA
124066605 5270 Rosid View MSA
123736883 5271 Pentapetalae View MSA
122791920 5272 Eudicot View MSA
121344534 5274 Embryophyte View MSA
123424385 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain