Gene : Carub.0008s2350 C. rubella v1.1

Defline:  (1 of 8) PF07816 - Protein of unknown function (DUF1645) (DUF1645) Genomic Order:  2350
Name:  ? Carub.0008s2350 Secondary Identifier:  ? PAC:39251646

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2350 0.5kb upstream 0.5kb upstream 1744 true scaffold_8: 11539511-11541254 Capsella rubella
Carub.0008s2350 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 11539511-11540010 Capsella rubella
Carub.0008s2350 0.5kb downstream 0.5kb downstream 1744 true scaffold_8: 11540011-11541754 Capsella rubella
Carub.0008s2350 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 11541255-11541754 Capsella rubella
Carub.0008s2350 1.0kb upstream 1.0kb upstream 2244 true scaffold_8: 11539011-11541254 Capsella rubella
Carub.0008s2350 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 11539011-11540010 Capsella rubella
Carub.0008s2350 1.0kb downstream 1.0kb downstream 2244 true scaffold_8: 11540011-11542254 Capsella rubella
Carub.0008s2350 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 11541255-11542254 Capsella rubella
Carub.0008s2350 2.0kb upstream 2.0kb upstream 3244 true scaffold_8: 11538011-11541254 Capsella rubella
Carub.0008s2350 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 11538011-11540010 Capsella rubella
Carub.0008s2350 2.0kb downstream 2.0kb downstream 3244 true scaffold_8: 11540011-11543254 Capsella rubella
Carub.0008s2350 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 11541255-11543254 Capsella rubella
Carub.0008s2350 5.0kb upstream 5.0kb upstream 6244 true scaffold_8: 11535011-11541254 Capsella rubella
Carub.0008s2350 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 11535011-11540010 Capsella rubella
Carub.0008s2350 5.0kb downstream 5.0kb downstream 6244 true scaffold_8: 11540011-11546254 Capsella rubella
Carub.0008s2350 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 11541255-11546254 Capsella rubella
Carub.0008s2350 10.0kb upstream 10.0kb upstream 11244 true scaffold_8: 11530011-11541254 Capsella rubella
Carub.0008s2350 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 11530011-11540010 Capsella rubella
Carub.0008s2350 10.0kb downstream 10.0kb downstream 11244 true scaffold_8: 11540011-11551254 Capsella rubella
Carub.0008s2350 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 11541255-11551254 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367026 5261 Brassicaceae View MSA
123834693 5264 Brassicales-Malvales View MSA
124349281 5266 SBM View MSA
124246091 5268 Malvidae View MSA
124070219 5270 Rosid View MSA
123743916 5271 Pentapetalae View MSA
122785611 5272 Eudicot View MSA
122048154 5273 Angiosperm View MSA
121310868 5274 Embryophyte View MSA
123348251 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain