Gene : Carub.0008s2703 C. rubella v1.1

Defline:  (1 of 3) PTHR32370//PTHR32370:SF26 - FAMILY NOT NAMED // BTB/POZ DOMAIN-CONTAINING PROTEIN NPY3-RELATED Genomic Order:  2703
Name:  ? Carub.0008s2703 Secondary Identifier:  ? PAC:39251934

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2703 0.5kb upstream 0.5kb upstream 3930 true scaffold_8: 12800286-12804215 Capsella rubella
Carub.0008s2703 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 12800286-12800785 Capsella rubella
Carub.0008s2703 0.5kb downstream 0.5kb downstream 3930 true scaffold_8: 12800786-12804715 Capsella rubella
Carub.0008s2703 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 12804216-12804715 Capsella rubella
Carub.0008s2703 1.0kb upstream 1.0kb upstream 4430 true scaffold_8: 12799786-12804215 Capsella rubella
Carub.0008s2703 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 12799786-12800785 Capsella rubella
Carub.0008s2703 1.0kb downstream 1.0kb downstream 4430 true scaffold_8: 12800786-12805215 Capsella rubella
Carub.0008s2703 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 12804216-12805215 Capsella rubella
Carub.0008s2703 2.0kb upstream 2.0kb upstream 5430 true scaffold_8: 12798786-12804215 Capsella rubella
Carub.0008s2703 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 12798786-12800785 Capsella rubella
Carub.0008s2703 2.0kb downstream 2.0kb downstream 5430 true scaffold_8: 12800786-12806215 Capsella rubella
Carub.0008s2703 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 12804216-12806215 Capsella rubella
Carub.0008s2703 5.0kb upstream 5.0kb upstream 8430 true scaffold_8: 12795786-12804215 Capsella rubella
Carub.0008s2703 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 12795786-12800785 Capsella rubella
Carub.0008s2703 5.0kb downstream 5.0kb downstream 8430 true scaffold_8: 12800786-12809215 Capsella rubella
Carub.0008s2703 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 12804216-12809215 Capsella rubella
Carub.0008s2703 10.0kb upstream 10.0kb upstream 13430 true scaffold_8: 12790786-12804215 Capsella rubella
Carub.0008s2703 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 12790786-12800785 Capsella rubella
Carub.0008s2703 10.0kb downstream 10.0kb downstream 13430 true scaffold_8: 12800786-12814215 Capsella rubella
Carub.0008s2703 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 12804216-12814215 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368338 5261 Brassicaceae View MSA
123838068 5264 Brassicales-Malvales View MSA
124348062 5266 SBM View MSA
124249911 5268 Malvidae View MSA
124069258 5270 Rosid View MSA
123743807 5271 Pentapetalae View MSA
122790043 5272 Eudicot View MSA
122047329 5273 Angiosperm View MSA
121350883 5274 Embryophyte View MSA
123381921 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain