Gene : Carub.0008s2485 C. rubella v1.1
Defline:  (1 of 2) PTHR10048//PTHR10048:SF22 - PHOSPHATIDYLINOSITOL KINASE // PHOSPHATIDYLINOSITOL 4-KINASE BETA Genomic Order:  2485
Name:  ? Carub.0008s2485 Secondary Identifier:  ? PAC:39250911
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6351 Capsella rubella pathologic  
Crubella PWY-6352 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2485 0.5kb upstream 0.5kb upstream 7764 true scaffold_8: 12001935-12009698 Capsella rubella
Carub.0008s2485 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 12009199-12009698 Capsella rubella
Carub.0008s2485 0.5kb downstream 0.5kb downstream 7764 true scaffold_8: 12001435-12009198 Capsella rubella
Carub.0008s2485 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 12001435-12001934 Capsella rubella
Carub.0008s2485 1.0kb upstream 1.0kb upstream 8264 true scaffold_8: 12001935-12010198 Capsella rubella
Carub.0008s2485 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 12009199-12010198 Capsella rubella
Carub.0008s2485 1.0kb downstream 1.0kb downstream 8264 true scaffold_8: 12000935-12009198 Capsella rubella
Carub.0008s2485 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 12000935-12001934 Capsella rubella
Carub.0008s2485 2.0kb upstream 2.0kb upstream 9264 true scaffold_8: 12001935-12011198 Capsella rubella
Carub.0008s2485 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 12009199-12011198 Capsella rubella
Carub.0008s2485 2.0kb downstream 2.0kb downstream 9264 true scaffold_8: 11999935-12009198 Capsella rubella
Carub.0008s2485 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 11999935-12001934 Capsella rubella
Carub.0008s2485 5.0kb upstream 5.0kb upstream 12264 true scaffold_8: 12001935-12014198 Capsella rubella
Carub.0008s2485 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 12009199-12014198 Capsella rubella
Carub.0008s2485 5.0kb downstream 5.0kb downstream 12264 true scaffold_8: 11996935-12009198 Capsella rubella
Carub.0008s2485 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 11996935-12001934 Capsella rubella
Carub.0008s2485 10.0kb upstream 10.0kb upstream 17264 true scaffold_8: 12001935-12019198 Capsella rubella
Carub.0008s2485 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 12009199-12019198 Capsella rubella
Carub.0008s2485 10.0kb downstream 10.0kb downstream 17264 true scaffold_8: 11991935-12009198 Capsella rubella
Carub.0008s2485 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 11991935-12001934 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376773 5261 Brassicaceae View MSA
123836100 5264 Brassicales-Malvales View MSA
124343790 5266 SBM View MSA
124239009 5268 Malvidae View MSA
124066780 5270 Rosid View MSA
123749784 5271 Pentapetalae View MSA
122786671 5272 Eudicot View MSA
122047104 5273 Angiosperm View MSA
121345174 5274 Embryophyte View MSA
123380170 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain