Gene : Carub.0008s2482 C. rubella v1.1
Defline:  (1 of 1) K02701 - photosystem I subunit PsaN (psaN) Genomic Order:  2482
Name:  ? Carub.0008s2482 Secondary Identifier:  ? PAC:39251213
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PHOTOALL-PWY Capsella rubella pathologic  
Crubella PWY-101 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2482 0.5kb upstream 0.5kb upstream 1373 true scaffold_8: 11992792-11994164 Capsella rubella
Carub.0008s2482 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 11993665-11994164 Capsella rubella
Carub.0008s2482 0.5kb downstream 0.5kb downstream 1373 true scaffold_8: 11992292-11993664 Capsella rubella
Carub.0008s2482 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 11992292-11992791 Capsella rubella
Carub.0008s2482 1.0kb upstream 1.0kb upstream 1873 true scaffold_8: 11992792-11994664 Capsella rubella
Carub.0008s2482 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 11993665-11994664 Capsella rubella
Carub.0008s2482 1.0kb downstream 1.0kb downstream 1873 true scaffold_8: 11991792-11993664 Capsella rubella
Carub.0008s2482 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 11991792-11992791 Capsella rubella
Carub.0008s2482 2.0kb upstream 2.0kb upstream 2873 true scaffold_8: 11992792-11995664 Capsella rubella
Carub.0008s2482 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 11993665-11995664 Capsella rubella
Carub.0008s2482 2.0kb downstream 2.0kb downstream 2873 true scaffold_8: 11990792-11993664 Capsella rubella
Carub.0008s2482 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 11990792-11992791 Capsella rubella
Carub.0008s2482 5.0kb upstream 5.0kb upstream 5873 true scaffold_8: 11992792-11998664 Capsella rubella
Carub.0008s2482 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 11993665-11998664 Capsella rubella
Carub.0008s2482 5.0kb downstream 5.0kb downstream 5873 true scaffold_8: 11987792-11993664 Capsella rubella
Carub.0008s2482 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 11987792-11992791 Capsella rubella
Carub.0008s2482 10.0kb upstream 10.0kb upstream 10873 true scaffold_8: 11992792-12003664 Capsella rubella
Carub.0008s2482 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 11993665-12003664 Capsella rubella
Carub.0008s2482 10.0kb downstream 10.0kb downstream 10873 true scaffold_8: 11982792-11993664 Capsella rubella
Carub.0008s2482 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 11982792-11992791 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379463 5261 Brassicaceae View MSA
123830230 5264 Brassicales-Malvales View MSA
124345790 5266 SBM View MSA
124247840 5268 Malvidae View MSA
124061914 5270 Rosid View MSA
123739503 5271 Pentapetalae View MSA
122786700 5272 Eudicot View MSA
122046387 5273 Angiosperm View MSA
121346900 5274 Embryophyte View MSA
123425334 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain