Gene : Carub.0006s0675 C. rubella v1.1
Defline:  (1 of 3) 3.2.1.167//3.2.1.31 - Baicalin-beta-D-glucuronidase / Baicalinase // Beta-glucuronidase Genomic Order:  675
Name:  ? Carub.0006s0675 Secondary Identifier:  ? PAC:39247207
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7213 Capsella rubella pathologic  
Crubella PWY-7214 Capsella rubella pathologic  
Crubella PWY-7445 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0675 0.5kb upstream 0.5kb upstream 4062 true scaffold_6: 2480331-2484392 Capsella rubella
Carub.0006s0675 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2480331-2480830 Capsella rubella
Carub.0006s0675 0.5kb downstream 0.5kb downstream 4062 true scaffold_6: 2480831-2484892 Capsella rubella
Carub.0006s0675 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2484393-2484892 Capsella rubella
Carub.0006s0675 1.0kb upstream 1.0kb upstream 4562 true scaffold_6: 2479831-2484392 Capsella rubella
Carub.0006s0675 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2479831-2480830 Capsella rubella
Carub.0006s0675 1.0kb downstream 1.0kb downstream 4562 true scaffold_6: 2480831-2485392 Capsella rubella
Carub.0006s0675 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2484393-2485392 Capsella rubella
Carub.0006s0675 2.0kb upstream 2.0kb upstream 5562 true scaffold_6: 2478831-2484392 Capsella rubella
Carub.0006s0675 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2478831-2480830 Capsella rubella
Carub.0006s0675 2.0kb downstream 2.0kb downstream 5562 true scaffold_6: 2480831-2486392 Capsella rubella
Carub.0006s0675 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2484393-2486392 Capsella rubella
Carub.0006s0675 5.0kb upstream 5.0kb upstream 8562 true scaffold_6: 2475831-2484392 Capsella rubella
Carub.0006s0675 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2475831-2480830 Capsella rubella
Carub.0006s0675 5.0kb downstream 5.0kb downstream 8562 true scaffold_6: 2480831-2489392 Capsella rubella
Carub.0006s0675 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2484393-2489392 Capsella rubella
Carub.0006s0675 10.0kb upstream 10.0kb upstream 13562 true scaffold_6: 2470831-2484392 Capsella rubella
Carub.0006s0675 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2470831-2480830 Capsella rubella
Carub.0006s0675 10.0kb downstream 10.0kb downstream 13562 true scaffold_6: 2480831-2494392 Capsella rubella
Carub.0006s0675 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2484393-2494392 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369046 5261 Brassicaceae View MSA
123838314 5264 Brassicales-Malvales View MSA
124339334 5266 SBM View MSA
124245373 5268 Malvidae View MSA
124070666 5270 Rosid View MSA
123745187 5271 Pentapetalae View MSA
122795641 5272 Eudicot View MSA
122049598 5273 Angiosperm View MSA
121348264 5274 Embryophyte View MSA
123380798 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain