Gene : Carub.0008s1909 C. rubella v1.1
Defline:  (1 of 1) PTHR31165//PTHR31165:SF14 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 5 Genomic Order:  1909
Name:  ? Carub.0008s1909 Secondary Identifier:  ? PAC:39252714
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1909 0.5kb upstream 0.5kb upstream 1663 true scaffold_8: 9846904-9848566 Capsella rubella
Carub.0008s1909 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 9848067-9848566 Capsella rubella
Carub.0008s1909 0.5kb downstream 0.5kb downstream 1663 true scaffold_8: 9846404-9848066 Capsella rubella
Carub.0008s1909 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 9846404-9846903 Capsella rubella
Carub.0008s1909 1.0kb upstream 1.0kb upstream 2163 true scaffold_8: 9846904-9849066 Capsella rubella
Carub.0008s1909 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 9848067-9849066 Capsella rubella
Carub.0008s1909 1.0kb downstream 1.0kb downstream 2163 true scaffold_8: 9845904-9848066 Capsella rubella
Carub.0008s1909 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 9845904-9846903 Capsella rubella
Carub.0008s1909 2.0kb upstream 2.0kb upstream 3163 true scaffold_8: 9846904-9850066 Capsella rubella
Carub.0008s1909 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 9848067-9850066 Capsella rubella
Carub.0008s1909 2.0kb downstream 2.0kb downstream 3163 true scaffold_8: 9844904-9848066 Capsella rubella
Carub.0008s1909 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 9844904-9846903 Capsella rubella
Carub.0008s1909 5.0kb upstream 5.0kb upstream 6163 true scaffold_8: 9846904-9853066 Capsella rubella
Carub.0008s1909 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 9848067-9853066 Capsella rubella
Carub.0008s1909 5.0kb downstream 5.0kb downstream 6163 true scaffold_8: 9841904-9848066 Capsella rubella
Carub.0008s1909 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 9841904-9846903 Capsella rubella
Carub.0008s1909 10.0kb upstream 10.0kb upstream 11163 true scaffold_8: 9846904-9858066 Capsella rubella
Carub.0008s1909 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 9848067-9858066 Capsella rubella
Carub.0008s1909 10.0kb downstream 10.0kb downstream 11163 true scaffold_8: 9836904-9848066 Capsella rubella
Carub.0008s1909 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 9836904-9846903 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370941 5261 Brassicaceae View MSA
123800073 5264 Brassicales-Malvales View MSA
124297527 5266 SBM View MSA
124149389 5268 Malvidae View MSA
123875206 5270 Rosid View MSA
123459070 5271 Pentapetalae View MSA
122494465 5272 Eudicot View MSA
122049887 5273 Angiosperm View MSA
121351474 5274 Embryophyte View MSA
123382179 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain