Gene : Carub.0008s2304 C. rubella v1.1
Defline:  (1 of 1) PTHR31080//PTHR31080:SF19 - FAMILY NOT NAMED // PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN Genomic Order:  2304
Name:  ? Carub.0008s2304 Secondary Identifier:  ? PAC:39251748
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-1081 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2304 0.5kb upstream 0.5kb upstream 1265 true scaffold_8: 11335101-11336365 Capsella rubella
Carub.0008s2304 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 11335101-11335600 Capsella rubella
Carub.0008s2304 0.5kb downstream 0.5kb downstream 1265 true scaffold_8: 11335601-11336865 Capsella rubella
Carub.0008s2304 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 11336366-11336865 Capsella rubella
Carub.0008s2304 1.0kb upstream 1.0kb upstream 1765 true scaffold_8: 11334601-11336365 Capsella rubella
Carub.0008s2304 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 11334601-11335600 Capsella rubella
Carub.0008s2304 1.0kb downstream 1.0kb downstream 1765 true scaffold_8: 11335601-11337365 Capsella rubella
Carub.0008s2304 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 11336366-11337365 Capsella rubella
Carub.0008s2304 2.0kb upstream 2.0kb upstream 2765 true scaffold_8: 11333601-11336365 Capsella rubella
Carub.0008s2304 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 11333601-11335600 Capsella rubella
Carub.0008s2304 2.0kb downstream 2.0kb downstream 2765 true scaffold_8: 11335601-11338365 Capsella rubella
Carub.0008s2304 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 11336366-11338365 Capsella rubella
Carub.0008s2304 5.0kb upstream 5.0kb upstream 5765 true scaffold_8: 11330601-11336365 Capsella rubella
Carub.0008s2304 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 11330601-11335600 Capsella rubella
Carub.0008s2304 5.0kb downstream 5.0kb downstream 5765 true scaffold_8: 11335601-11341365 Capsella rubella
Carub.0008s2304 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 11336366-11341365 Capsella rubella
Carub.0008s2304 10.0kb upstream 10.0kb upstream 10765 true scaffold_8: 11325601-11336365 Capsella rubella
Carub.0008s2304 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 11325601-11335600 Capsella rubella
Carub.0008s2304 10.0kb downstream 10.0kb downstream 10765 true scaffold_8: 11335601-11346365 Capsella rubella
Carub.0008s2304 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 11336366-11346365 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376892 5261 Brassicaceae View MSA
123829833 5264 Brassicales-Malvales View MSA
124349206 5266 SBM View MSA
124242648 5268 Malvidae View MSA
124061401 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain