Gene : Carub.0006s0910 C. rubella v1.1
Defline:  (1 of 1) 2.1.1.177 - 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase / rRNA large subunit methyltransferase H Genomic Order:  910
Name:  ? Carub.0006s0910 Secondary Identifier:  ? PAC:39248831
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0910 0.5kb upstream 0.5kb upstream 2125 true scaffold_6: 3306791-3308915 Capsella rubella
Carub.0006s0910 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 3308416-3308915 Capsella rubella
Carub.0006s0910 0.5kb downstream 0.5kb downstream 2125 true scaffold_6: 3306291-3308415 Capsella rubella
Carub.0006s0910 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 3306291-3306790 Capsella rubella
Carub.0006s0910 1.0kb upstream 1.0kb upstream 2625 true scaffold_6: 3306791-3309415 Capsella rubella
Carub.0006s0910 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 3308416-3309415 Capsella rubella
Carub.0006s0910 1.0kb downstream 1.0kb downstream 2625 true scaffold_6: 3305791-3308415 Capsella rubella
Carub.0006s0910 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 3305791-3306790 Capsella rubella
Carub.0006s0910 2.0kb upstream 2.0kb upstream 3625 true scaffold_6: 3306791-3310415 Capsella rubella
Carub.0006s0910 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 3308416-3310415 Capsella rubella
Carub.0006s0910 2.0kb downstream 2.0kb downstream 3625 true scaffold_6: 3304791-3308415 Capsella rubella
Carub.0006s0910 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 3304791-3306790 Capsella rubella
Carub.0006s0910 5.0kb upstream 5.0kb upstream 6625 true scaffold_6: 3306791-3313415 Capsella rubella
Carub.0006s0910 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 3308416-3313415 Capsella rubella
Carub.0006s0910 5.0kb downstream 5.0kb downstream 6625 true scaffold_6: 3301791-3308415 Capsella rubella
Carub.0006s0910 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 3301791-3306790 Capsella rubella
Carub.0006s0910 10.0kb upstream 10.0kb upstream 11625 true scaffold_6: 3306791-3318415 Capsella rubella
Carub.0006s0910 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 3308416-3318415 Capsella rubella
Carub.0006s0910 10.0kb downstream 10.0kb downstream 11625 true scaffold_6: 3296791-3308415 Capsella rubella
Carub.0006s0910 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 3296791-3306790 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041237 5273 Angiosperm View MSA
122371488 5261 Brassicaceae View MSA
123831727 5264 Brassicales-Malvales View MSA
124340896 5266 SBM View MSA
124241004 5268 Malvidae View MSA
124065291 5270 Rosid View MSA
123737666 5271 Pentapetalae View MSA
122786404 5272 Eudicot View MSA
121344768 5274 Embryophyte View MSA
123424832 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain