Gene : Carub.0120s0001 C. rubella v1.1
Defline:  (1 of 2) PF00069//PF14380 - Protein kinase domain (Pkinase) // Wall-associated receptor kinase C-terminal (WAK_assoc) Genomic Order:  1
Name:  ? Carub.0120s0001 Secondary Identifier:  ? PAC:39223689
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7409 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0120s0001 0.5kb upstream 0.5kb upstream 3655 true scaffold_120: 586-4240 Capsella rubella
Carub.0120s0001 0.5kb upstream 0.5kb upstream 500 false scaffold_120: 3741-4240 Capsella rubella
Carub.0120s0001 0.5kb downstream 0.5kb downstream 3655 true scaffold_120: 86-3740 Capsella rubella
Carub.0120s0001 0.5kb downstream 0.5kb downstream 500 false scaffold_120: 86-585 Capsella rubella
Carub.0120s0001 1.0kb upstream 1.0kb upstream 4155 true scaffold_120: 586-4740 Capsella rubella
Carub.0120s0001 1.0kb upstream 1.0kb upstream 1000 false scaffold_120: 3741-4740 Capsella rubella
Carub.0120s0001 1.0kb downstream 1.0kb downstream 3740 true scaffold_120: 1-3740 Capsella rubella
Carub.0120s0001 1.0kb downstream 1.0kb downstream 585 false scaffold_120: 1-585 Capsella rubella
Carub.0120s0001 2.0kb upstream 2.0kb upstream 5155 true scaffold_120: 586-5740 Capsella rubella
Carub.0120s0001 2.0kb upstream 2.0kb upstream 2000 false scaffold_120: 3741-5740 Capsella rubella
Carub.0120s0001 2.0kb downstream 2.0kb downstream 3740 true scaffold_120: 1-3740 Capsella rubella
Carub.0120s0001 2.0kb downstream 2.0kb downstream 585 false scaffold_120: 1-585 Capsella rubella
Carub.0120s0001 5.0kb upstream 5.0kb upstream 8155 true scaffold_120: 586-8740 Capsella rubella
Carub.0120s0001 5.0kb upstream 5.0kb upstream 5000 false scaffold_120: 3741-8740 Capsella rubella
Carub.0120s0001 5.0kb downstream 5.0kb downstream 3740 true scaffold_120: 1-3740 Capsella rubella
Carub.0120s0001 5.0kb downstream 5.0kb downstream 585 false scaffold_120: 1-585 Capsella rubella
Carub.0120s0001 10.0kb upstream 10.0kb upstream 9700 true scaffold_120: 586-10285 Capsella rubella
Carub.0120s0001 10.0kb upstream 10.0kb upstream 6545 false scaffold_120: 3741-10285 Capsella rubella
Carub.0120s0001 10.0kb downstream 10.0kb downstream 3740 true scaffold_120: 1-3740 Capsella rubella
Carub.0120s0001 10.0kb downstream 10.0kb downstream 585 false scaffold_120: 1-585 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380967 5261 Brassicaceae View MSA
123840146 5264 Brassicales-Malvales View MSA
124350842 5266 SBM View MSA
124254633 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain