Gene : Carub.0008s0040 C. rubella v1.1
Defline:  (1 of 15) PF04784//PF14389 - Protein of unknown function, DUF547 (DUF547) // Leucine-zipper of ternary complex factor MIP1 (Lzipper-MIP1) Genomic Order:  40
Name:  ? Carub.0008s0040 Secondary Identifier:  ? PAC:39250572
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0040 0.5kb upstream 0.5kb upstream 6052 true scaffold_8: 126434-132485 Capsella rubella
Carub.0008s0040 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 126434-126933 Capsella rubella
Carub.0008s0040 0.5kb downstream 0.5kb downstream 6052 true scaffold_8: 126934-132985 Capsella rubella
Carub.0008s0040 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 132486-132985 Capsella rubella
Carub.0008s0040 1.0kb upstream 1.0kb upstream 6552 true scaffold_8: 125934-132485 Capsella rubella
Carub.0008s0040 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 125934-126933 Capsella rubella
Carub.0008s0040 1.0kb downstream 1.0kb downstream 6552 true scaffold_8: 126934-133485 Capsella rubella
Carub.0008s0040 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 132486-133485 Capsella rubella
Carub.0008s0040 2.0kb upstream 2.0kb upstream 7552 true scaffold_8: 124934-132485 Capsella rubella
Carub.0008s0040 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 124934-126933 Capsella rubella
Carub.0008s0040 2.0kb downstream 2.0kb downstream 7552 true scaffold_8: 126934-134485 Capsella rubella
Carub.0008s0040 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 132486-134485 Capsella rubella
Carub.0008s0040 5.0kb upstream 5.0kb upstream 10552 true scaffold_8: 121934-132485 Capsella rubella
Carub.0008s0040 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 121934-126933 Capsella rubella
Carub.0008s0040 5.0kb downstream 5.0kb downstream 10552 true scaffold_8: 126934-137485 Capsella rubella
Carub.0008s0040 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 132486-137485 Capsella rubella
Carub.0008s0040 10.0kb upstream 10.0kb upstream 15552 true scaffold_8: 116934-132485 Capsella rubella
Carub.0008s0040 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 116934-126933 Capsella rubella
Carub.0008s0040 10.0kb downstream 10.0kb downstream 15552 true scaffold_8: 126934-142485 Capsella rubella
Carub.0008s0040 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 132486-142485 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380508 5261 Brassicaceae View MSA
123836572 5264 Brassicales-Malvales View MSA
124337561 5266 SBM View MSA
124240371 5268 Malvidae View MSA
124069316 5270 Rosid View MSA
123741227 5271 Pentapetalae View MSA
122791829 5272 Eudicot View MSA
122043072 5273 Angiosperm View MSA
121350596 5274 Embryophyte View MSA
123381815 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain