Gene : Carub.0002s2554 C. rubella v1.1
Defline:  (1 of 3) 3.4.19.9 - Gamma-glutamyl hydrolase / Pteroyl-poly-alpha-glutamate hydrolase Genomic Order:  2554
Name:  ? Carub.0002s2554 Secondary Identifier:  ? PAC:39245291
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-2161B Capsella rubella pathologic  
Crubella PWY-6842 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2554 0.5kb upstream 0.5kb upstream 3145 true scaffold_2: 13268485-13271629 Capsella rubella
Carub.0002s2554 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 13268485-13268984 Capsella rubella
Carub.0002s2554 0.5kb downstream 0.5kb downstream 3145 true scaffold_2: 13268985-13272129 Capsella rubella
Carub.0002s2554 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 13271630-13272129 Capsella rubella
Carub.0002s2554 1.0kb upstream 1.0kb upstream 3645 true scaffold_2: 13267985-13271629 Capsella rubella
Carub.0002s2554 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 13267985-13268984 Capsella rubella
Carub.0002s2554 1.0kb downstream 1.0kb downstream 3645 true scaffold_2: 13268985-13272629 Capsella rubella
Carub.0002s2554 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 13271630-13272629 Capsella rubella
Carub.0002s2554 2.0kb upstream 2.0kb upstream 4645 true scaffold_2: 13266985-13271629 Capsella rubella
Carub.0002s2554 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 13266985-13268984 Capsella rubella
Carub.0002s2554 2.0kb downstream 2.0kb downstream 4645 true scaffold_2: 13268985-13273629 Capsella rubella
Carub.0002s2554 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 13271630-13273629 Capsella rubella
Carub.0002s2554 5.0kb upstream 5.0kb upstream 7645 true scaffold_2: 13263985-13271629 Capsella rubella
Carub.0002s2554 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 13263985-13268984 Capsella rubella
Carub.0002s2554 5.0kb downstream 5.0kb downstream 7645 true scaffold_2: 13268985-13276629 Capsella rubella
Carub.0002s2554 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 13271630-13276629 Capsella rubella
Carub.0002s2554 10.0kb upstream 10.0kb upstream 12645 true scaffold_2: 13258985-13271629 Capsella rubella
Carub.0002s2554 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 13258985-13268984 Capsella rubella
Carub.0002s2554 10.0kb downstream 10.0kb downstream 12645 true scaffold_2: 13268985-13281629 Capsella rubella
Carub.0002s2554 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 13271630-13281629 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370552 5261 Brassicaceae View MSA
123837897 5264 Brassicales-Malvales View MSA
124347149 5266 SBM View MSA
124244715 5268 Malvidae View MSA
124064473 5270 Rosid View MSA
123739690 5271 Pentapetalae View MSA
122790528 5272 Eudicot View MSA
122043288 5273 Angiosperm View MSA
121347510 5274 Embryophyte View MSA
123426892 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain