Gene : Carub.0002s2575 C. rubella v1.1
Defline:  (1 of 1) PTHR26312//PTHR26312:SF0 - FAMILY NOT NAMED // TETRATRICOPEPTIDE REPEAT PROTEIN 5 Genomic Order:  2575
Name:  ? Carub.0002s2575 Secondary Identifier:  ? PAC:39244981
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2575 0.5kb upstream 0.5kb upstream 4637 true scaffold_2: 13330468-13335104 Capsella rubella
Carub.0002s2575 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 13334605-13335104 Capsella rubella
Carub.0002s2575 0.5kb downstream 0.5kb downstream 4637 true scaffold_2: 13329968-13334604 Capsella rubella
Carub.0002s2575 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 13329968-13330467 Capsella rubella
Carub.0002s2575 1.0kb upstream 1.0kb upstream 5137 true scaffold_2: 13330468-13335604 Capsella rubella
Carub.0002s2575 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 13334605-13335604 Capsella rubella
Carub.0002s2575 1.0kb downstream 1.0kb downstream 5137 true scaffold_2: 13329468-13334604 Capsella rubella
Carub.0002s2575 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 13329468-13330467 Capsella rubella
Carub.0002s2575 2.0kb upstream 2.0kb upstream 6137 true scaffold_2: 13330468-13336604 Capsella rubella
Carub.0002s2575 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 13334605-13336604 Capsella rubella
Carub.0002s2575 2.0kb downstream 2.0kb downstream 6137 true scaffold_2: 13328468-13334604 Capsella rubella
Carub.0002s2575 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 13328468-13330467 Capsella rubella
Carub.0002s2575 5.0kb upstream 5.0kb upstream 9137 true scaffold_2: 13330468-13339604 Capsella rubella
Carub.0002s2575 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 13334605-13339604 Capsella rubella
Carub.0002s2575 5.0kb downstream 5.0kb downstream 9137 true scaffold_2: 13325468-13334604 Capsella rubella
Carub.0002s2575 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 13325468-13330467 Capsella rubella
Carub.0002s2575 10.0kb upstream 10.0kb upstream 14137 true scaffold_2: 13330468-13344604 Capsella rubella
Carub.0002s2575 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 13334605-13344604 Capsella rubella
Carub.0002s2575 10.0kb downstream 10.0kb downstream 14137 true scaffold_2: 13320468-13334604 Capsella rubella
Carub.0002s2575 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 13320468-13330467 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041405 5273 Angiosperm View MSA
122376485 5261 Brassicaceae View MSA
123833594 5264 Brassicales-Malvales View MSA
124321879 5266 SBM View MSA
124251725 5268 Malvidae View MSA
124065158 5270 Rosid View MSA
123747487 5271 Pentapetalae View MSA
122792226 5272 Eudicot View MSA
121343833 5274 Embryophyte View MSA
123426406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain