Gene : Carub.0006s0913 C. rubella v1.1
Defline:  (1 of 3) PTHR22937//PTHR22937:SF53 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  913
Name:  ? Carub.0006s0913 Secondary Identifier:  ? PAC:39249164
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0913 0.5kb upstream 0.5kb upstream 3804 true scaffold_6: 3317547-3321350 Capsella rubella
Carub.0006s0913 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 3320851-3321350 Capsella rubella
Carub.0006s0913 0.5kb downstream 0.5kb downstream 3804 true scaffold_6: 3317047-3320850 Capsella rubella
Carub.0006s0913 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 3317047-3317546 Capsella rubella
Carub.0006s0913 1.0kb upstream 1.0kb upstream 4304 true scaffold_6: 3317547-3321850 Capsella rubella
Carub.0006s0913 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 3320851-3321850 Capsella rubella
Carub.0006s0913 1.0kb downstream 1.0kb downstream 4304 true scaffold_6: 3316547-3320850 Capsella rubella
Carub.0006s0913 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 3316547-3317546 Capsella rubella
Carub.0006s0913 2.0kb upstream 2.0kb upstream 5304 true scaffold_6: 3317547-3322850 Capsella rubella
Carub.0006s0913 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 3320851-3322850 Capsella rubella
Carub.0006s0913 2.0kb downstream 2.0kb downstream 5304 true scaffold_6: 3315547-3320850 Capsella rubella
Carub.0006s0913 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 3315547-3317546 Capsella rubella
Carub.0006s0913 5.0kb upstream 5.0kb upstream 8304 true scaffold_6: 3317547-3325850 Capsella rubella
Carub.0006s0913 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 3320851-3325850 Capsella rubella
Carub.0006s0913 5.0kb downstream 5.0kb downstream 8304 true scaffold_6: 3312547-3320850 Capsella rubella
Carub.0006s0913 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 3312547-3317546 Capsella rubella
Carub.0006s0913 10.0kb upstream 10.0kb upstream 13304 true scaffold_6: 3317547-3330850 Capsella rubella
Carub.0006s0913 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 3320851-3330850 Capsella rubella
Carub.0006s0913 10.0kb downstream 10.0kb downstream 13304 true scaffold_6: 3307547-3320850 Capsella rubella
Carub.0006s0913 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 3307547-3317546 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372628 5261 Brassicaceae View MSA
123840235 5264 Brassicales-Malvales View MSA
124341525 5266 SBM View MSA
124242288 5268 Malvidae View MSA
124062589 5270 Rosid View MSA
123746879 5271 Pentapetalae View MSA
122795364 5272 Eudicot View MSA
122045356 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351500 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain