Gene : Carub.0002s2583 C. rubella v1.1
Defline:  (1 of 2) K15815 - lupeol synthase 2 (LUP2) Genomic Order:  2583
Name:  ? Carub.0002s2583 Secondary Identifier:  ? PAC:39244912
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-112 Capsella rubella pathologic  
Crubella PWY-5377 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2583 0.5kb upstream 0.5kb upstream 5350 true scaffold_2: 13363547-13368896 Capsella rubella
Carub.0002s2583 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 13363547-13364046 Capsella rubella
Carub.0002s2583 0.5kb downstream 0.5kb downstream 5350 true scaffold_2: 13364047-13369396 Capsella rubella
Carub.0002s2583 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 13368897-13369396 Capsella rubella
Carub.0002s2583 1.0kb upstream 1.0kb upstream 5850 true scaffold_2: 13363047-13368896 Capsella rubella
Carub.0002s2583 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 13363047-13364046 Capsella rubella
Carub.0002s2583 1.0kb downstream 1.0kb downstream 5850 true scaffold_2: 13364047-13369896 Capsella rubella
Carub.0002s2583 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 13368897-13369896 Capsella rubella
Carub.0002s2583 2.0kb upstream 2.0kb upstream 6850 true scaffold_2: 13362047-13368896 Capsella rubella
Carub.0002s2583 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 13362047-13364046 Capsella rubella
Carub.0002s2583 2.0kb downstream 2.0kb downstream 6850 true scaffold_2: 13364047-13370896 Capsella rubella
Carub.0002s2583 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 13368897-13370896 Capsella rubella
Carub.0002s2583 5.0kb upstream 5.0kb upstream 9850 true scaffold_2: 13359047-13368896 Capsella rubella
Carub.0002s2583 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 13359047-13364046 Capsella rubella
Carub.0002s2583 5.0kb downstream 5.0kb downstream 9850 true scaffold_2: 13364047-13373896 Capsella rubella
Carub.0002s2583 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 13368897-13373896 Capsella rubella
Carub.0002s2583 10.0kb upstream 10.0kb upstream 14850 true scaffold_2: 13354047-13368896 Capsella rubella
Carub.0002s2583 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 13354047-13364046 Capsella rubella
Carub.0002s2583 10.0kb downstream 10.0kb downstream 14850 true scaffold_2: 13364047-13378896 Capsella rubella
Carub.0002s2583 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 13368897-13378896 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791741 5273 Angiosperm View MSA
122370947 5261 Brassicaceae View MSA
123837659 5264 Brassicales-Malvales View MSA
124341185 5266 SBM View MSA
124240191 5268 Malvidae View MSA
124062069 5270 Rosid View MSA
123738080 5271 Pentapetalae View MSA
122788516 5272 Eudicot View MSA
121063041 5274 Embryophyte View MSA
123102827 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain