Gene : Carub.0002s2776 C. rubella v1.1
Defline:  (1 of 1) PTHR23406//PTHR23406:SF11 - MALIC ENZYME-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2776
Name:  ? Carub.0002s2776 Secondary Identifier:  ? PAC:39244964
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella GLUCONEO-PWY Capsella rubella pathologic  
Crubella PWY-241 Capsella rubella pathologic  
Crubella PWY-7117 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2776 0.5kb upstream 0.5kb upstream 4631 true scaffold_2: 14094288-14098918 Capsella rubella
Carub.0002s2776 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 14094288-14094787 Capsella rubella
Carub.0002s2776 0.5kb downstream 0.5kb downstream 4631 true scaffold_2: 14094788-14099418 Capsella rubella
Carub.0002s2776 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 14098919-14099418 Capsella rubella
Carub.0002s2776 1.0kb upstream 1.0kb upstream 5131 true scaffold_2: 14093788-14098918 Capsella rubella
Carub.0002s2776 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 14093788-14094787 Capsella rubella
Carub.0002s2776 1.0kb downstream 1.0kb downstream 5131 true scaffold_2: 14094788-14099918 Capsella rubella
Carub.0002s2776 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 14098919-14099918 Capsella rubella
Carub.0002s2776 2.0kb upstream 2.0kb upstream 6131 true scaffold_2: 14092788-14098918 Capsella rubella
Carub.0002s2776 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 14092788-14094787 Capsella rubella
Carub.0002s2776 2.0kb downstream 2.0kb downstream 6131 true scaffold_2: 14094788-14100918 Capsella rubella
Carub.0002s2776 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 14098919-14100918 Capsella rubella
Carub.0002s2776 5.0kb upstream 5.0kb upstream 9131 true scaffold_2: 14089788-14098918 Capsella rubella
Carub.0002s2776 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 14089788-14094787 Capsella rubella
Carub.0002s2776 5.0kb downstream 5.0kb downstream 9131 true scaffold_2: 14094788-14103918 Capsella rubella
Carub.0002s2776 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 14098919-14103918 Capsella rubella
Carub.0002s2776 10.0kb upstream 10.0kb upstream 14131 true scaffold_2: 14084788-14098918 Capsella rubella
Carub.0002s2776 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 14084788-14094787 Capsella rubella
Carub.0002s2776 10.0kb downstream 10.0kb downstream 11905 true scaffold_2: 14094788-14106692 Capsella rubella
Carub.0002s2776 10.0kb downstream 10.0kb downstream 7774 false scaffold_2: 14098919-14106692 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371392 5261 Brassicaceae View MSA
123831539 5264 Brassicales-Malvales View MSA
124336457 5266 SBM View MSA
124242817 5268 Malvidae View MSA
124068705 5270 Rosid View MSA
123751350 5271 Pentapetalae View MSA
122794130 5272 Eudicot View MSA
122042224 5273 Angiosperm View MSA
121345569 5274 Embryophyte View MSA
123428715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain