Gene : Carub.0002s2225 C. rubella v1.1
Defline:  (1 of 2) PTHR22952:SF162 - BZIP TRANSCRIPTION FACTOR ATB2 Genomic Order:  2225
Name:  ? Carub.0002s2225 Secondary Identifier:  ? PAC:39243053
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2225 0.5kb upstream 0.5kb upstream 1833 true scaffold_2: 11911198-11913030 Capsella rubella
Carub.0002s2225 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11911198-11911697 Capsella rubella
Carub.0002s2225 0.5kb downstream 0.5kb downstream 1833 true scaffold_2: 11911698-11913530 Capsella rubella
Carub.0002s2225 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11913031-11913530 Capsella rubella
Carub.0002s2225 1.0kb upstream 1.0kb upstream 2333 true scaffold_2: 11910698-11913030 Capsella rubella
Carub.0002s2225 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11910698-11911697 Capsella rubella
Carub.0002s2225 1.0kb downstream 1.0kb downstream 2333 true scaffold_2: 11911698-11914030 Capsella rubella
Carub.0002s2225 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11913031-11914030 Capsella rubella
Carub.0002s2225 2.0kb upstream 2.0kb upstream 3333 true scaffold_2: 11909698-11913030 Capsella rubella
Carub.0002s2225 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11909698-11911697 Capsella rubella
Carub.0002s2225 2.0kb downstream 2.0kb downstream 3333 true scaffold_2: 11911698-11915030 Capsella rubella
Carub.0002s2225 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11913031-11915030 Capsella rubella
Carub.0002s2225 5.0kb upstream 5.0kb upstream 6333 true scaffold_2: 11906698-11913030 Capsella rubella
Carub.0002s2225 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11906698-11911697 Capsella rubella
Carub.0002s2225 5.0kb downstream 5.0kb downstream 6333 true scaffold_2: 11911698-11918030 Capsella rubella
Carub.0002s2225 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11913031-11918030 Capsella rubella
Carub.0002s2225 10.0kb upstream 10.0kb upstream 11333 true scaffold_2: 11901698-11913030 Capsella rubella
Carub.0002s2225 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11901698-11911697 Capsella rubella
Carub.0002s2225 10.0kb downstream 10.0kb downstream 11333 true scaffold_2: 11911698-11923030 Capsella rubella
Carub.0002s2225 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11913031-11923030 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367736 5261 Brassicaceae View MSA
123839150 5264 Brassicales-Malvales View MSA
124350098 5266 SBM View MSA
124247996 5268 Malvidae View MSA
124069594 5270 Rosid View MSA
123751386 5271 Pentapetalae View MSA
122786761 5272 Eudicot View MSA
122045115 5273 Angiosperm View MSA
123428996 5275 Viridiplantae View MSA
121349851 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain