Gene : Carub.0002s2362 C. rubella v1.1
Defline:  (1 of 1) KOG4442 - Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis Genomic Order:  2362
Name:  ? Carub.0002s2362 Secondary Identifier:  ? PAC:39244311
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2362 0.5kb upstream 0.5kb upstream 3304 true scaffold_2: 12447925-12451228 Capsella rubella
Carub.0002s2362 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 12450729-12451228 Capsella rubella
Carub.0002s2362 0.5kb downstream 0.5kb downstream 3304 true scaffold_2: 12447425-12450728 Capsella rubella
Carub.0002s2362 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 12447425-12447924 Capsella rubella
Carub.0002s2362 1.0kb upstream 1.0kb upstream 3804 true scaffold_2: 12447925-12451728 Capsella rubella
Carub.0002s2362 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 12450729-12451728 Capsella rubella
Carub.0002s2362 1.0kb downstream 1.0kb downstream 3804 true scaffold_2: 12446925-12450728 Capsella rubella
Carub.0002s2362 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 12446925-12447924 Capsella rubella
Carub.0002s2362 2.0kb upstream 2.0kb upstream 4804 true scaffold_2: 12447925-12452728 Capsella rubella
Carub.0002s2362 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 12450729-12452728 Capsella rubella
Carub.0002s2362 2.0kb downstream 2.0kb downstream 4804 true scaffold_2: 12445925-12450728 Capsella rubella
Carub.0002s2362 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 12445925-12447924 Capsella rubella
Carub.0002s2362 5.0kb upstream 5.0kb upstream 7804 true scaffold_2: 12447925-12455728 Capsella rubella
Carub.0002s2362 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 12450729-12455728 Capsella rubella
Carub.0002s2362 5.0kb downstream 5.0kb downstream 7804 true scaffold_2: 12442925-12450728 Capsella rubella
Carub.0002s2362 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 12442925-12447924 Capsella rubella
Carub.0002s2362 10.0kb upstream 10.0kb upstream 12804 true scaffold_2: 12447925-12460728 Capsella rubella
Carub.0002s2362 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 12450729-12460728 Capsella rubella
Carub.0002s2362 10.0kb downstream 10.0kb downstream 12804 true scaffold_2: 12437925-12450728 Capsella rubella
Carub.0002s2362 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 12437925-12447924 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360305 5261 Brassicaceae View MSA
123830116 5264 Brassicales-Malvales View MSA
124343057 5266 SBM View MSA
124242259 5268 Malvidae View MSA
124065473 5270 Rosid View MSA
123751966 5271 Pentapetalae View MSA
122790455 5272 Eudicot View MSA
122049912 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121350319 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain