Gene : Carub.0002s2424 C. rubella v1.1
Defline:  (1 of 15) PF12854//PF13041 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  2424
Name:  ? Carub.0002s2424 Secondary Identifier:  ? PAC:39243146
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2424 0.5kb upstream 0.5kb upstream 1952 true scaffold_2: 12717106-12719057 Capsella rubella
Carub.0002s2424 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 12718558-12719057 Capsella rubella
Carub.0002s2424 0.5kb downstream 0.5kb downstream 1952 true scaffold_2: 12716606-12718557 Capsella rubella
Carub.0002s2424 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 12716606-12717105 Capsella rubella
Carub.0002s2424 1.0kb upstream 1.0kb upstream 2452 true scaffold_2: 12717106-12719557 Capsella rubella
Carub.0002s2424 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 12718558-12719557 Capsella rubella
Carub.0002s2424 1.0kb downstream 1.0kb downstream 2452 true scaffold_2: 12716106-12718557 Capsella rubella
Carub.0002s2424 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 12716106-12717105 Capsella rubella
Carub.0002s2424 2.0kb upstream 2.0kb upstream 3452 true scaffold_2: 12717106-12720557 Capsella rubella
Carub.0002s2424 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 12718558-12720557 Capsella rubella
Carub.0002s2424 2.0kb downstream 2.0kb downstream 3452 true scaffold_2: 12715106-12718557 Capsella rubella
Carub.0002s2424 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 12715106-12717105 Capsella rubella
Carub.0002s2424 5.0kb upstream 5.0kb upstream 6452 true scaffold_2: 12717106-12723557 Capsella rubella
Carub.0002s2424 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 12718558-12723557 Capsella rubella
Carub.0002s2424 5.0kb downstream 5.0kb downstream 6452 true scaffold_2: 12712106-12718557 Capsella rubella
Carub.0002s2424 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 12712106-12717105 Capsella rubella
Carub.0002s2424 10.0kb upstream 10.0kb upstream 11452 true scaffold_2: 12717106-12728557 Capsella rubella
Carub.0002s2424 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 12718558-12728557 Capsella rubella
Carub.0002s2424 10.0kb downstream 10.0kb downstream 11452 true scaffold_2: 12707106-12718557 Capsella rubella
Carub.0002s2424 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 12707106-12717105 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374185 5261 Brassicaceae View MSA
123829423 5264 Brassicales-Malvales View MSA
124337568 5266 SBM View MSA
124240725 5268 Malvidae View MSA
124066699 5270 Rosid View MSA
123739132 5271 Pentapetalae View MSA
122788969 5272 Eudicot View MSA
122045173 5273 Angiosperm View MSA
121310410 5274 Embryophyte View MSA
123347900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain