Gene : Carub.0002s2127 C. rubella v1.1
Defline:  (1 of 1) 1.3.1.83 - Geranylgeranyl diphosphate reductase / Geranylgeranyl reductase Genomic Order:  2127
Name:  ? Carub.0002s2127 Secondary Identifier:  ? PAC:39244214
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5063 Capsella rubella pathologic  
Crubella PWY-5064 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2127 0.5kb upstream 0.5kb upstream 2312 true scaffold_2: 11570993-11573304 Capsella rubella
Carub.0002s2127 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11570993-11571492 Capsella rubella
Carub.0002s2127 0.5kb downstream 0.5kb downstream 2312 true scaffold_2: 11571493-11573804 Capsella rubella
Carub.0002s2127 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11573305-11573804 Capsella rubella
Carub.0002s2127 1.0kb upstream 1.0kb upstream 2812 true scaffold_2: 11570493-11573304 Capsella rubella
Carub.0002s2127 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11570493-11571492 Capsella rubella
Carub.0002s2127 1.0kb downstream 1.0kb downstream 2812 true scaffold_2: 11571493-11574304 Capsella rubella
Carub.0002s2127 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11573305-11574304 Capsella rubella
Carub.0002s2127 2.0kb upstream 2.0kb upstream 3812 true scaffold_2: 11569493-11573304 Capsella rubella
Carub.0002s2127 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11569493-11571492 Capsella rubella
Carub.0002s2127 2.0kb downstream 2.0kb downstream 3812 true scaffold_2: 11571493-11575304 Capsella rubella
Carub.0002s2127 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11573305-11575304 Capsella rubella
Carub.0002s2127 5.0kb upstream 5.0kb upstream 6812 true scaffold_2: 11566493-11573304 Capsella rubella
Carub.0002s2127 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11566493-11571492 Capsella rubella
Carub.0002s2127 5.0kb downstream 5.0kb downstream 6812 true scaffold_2: 11571493-11578304 Capsella rubella
Carub.0002s2127 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11573305-11578304 Capsella rubella
Carub.0002s2127 10.0kb upstream 10.0kb upstream 11812 true scaffold_2: 11561493-11573304 Capsella rubella
Carub.0002s2127 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11561493-11571492 Capsella rubella
Carub.0002s2127 10.0kb downstream 10.0kb downstream 11812 true scaffold_2: 11571493-11583304 Capsella rubella
Carub.0002s2127 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11573305-11583304 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368864 5261 Brassicaceae View MSA
123831426 5264 Brassicales-Malvales View MSA
124345987 5266 SBM View MSA
124242880 5268 Malvidae View MSA
124070478 5270 Rosid View MSA
123742493 5271 Pentapetalae View MSA
122794040 5272 Eudicot View MSA
122041542 5273 Angiosperm View MSA
121345615 5274 Embryophyte View MSA
123424772 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain